Gene Information

Name : Pat9b_0889 (Pat9b_0889)
Accession : YP_004114769.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : putative exonuclease RdgC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 1017984 - 1018895 bp
Length : 912 bp
Strand : -
Note : PFAM: putative exonuclease RdgC; KEGG: eta:ETA_25550 recombination associated protein

DNA sequence :
ATGTTGTGGTTTAAAAATATGATGGTTTATCGTCTGAATCGTGACATTCCGCTGTCCGCAGACGATCTGGAAAAACAGCT
CGATGCCTTCACCTTCTCACCCTGCGGTAGCCAGGATATGGCGAAAACCGGTTGGGTTTCCCCTATGGGTAACCGCAGCG
AGGCGCTGACGCACGTGGTTAATGGTCAGATTGTGATCTGTGCCCGTACCGAGCAAAAAATTCTGCCTTCTCCGGTGGTC
AAACAGGCGCTGGAAGCCAAAATCGACAAGCTGGAAGCGGAACAAAGCCGCAAGCTGAAGAAGACGGAAAAGGACTCGTT
AAAAGACGAAGTACTGCACAGTTTGCTGCCGCGAGCCTTTAGCCGTTTCAGCCAGACCTTTATGTGGATCGACACCGTCA
ACAACCTGATTATCGTTGACTGCGCCAGTGCGAAAAAAGCCGAAGATACGCTGGCGCTGTTACGCAAAAGCCTCGGTTCA
CTGCCGGTGGTGCCGTTGACGCTGGAAAGCCCGATTGAACTGACGCTGACCGAGTGGGTGCGTTCAGGCCAGCTGCCAGC
CGGCTTCACCCTGATGGATGAAGCCGAGCTGAAAGCGCTACTGGAAGAAGGTGGCGTGATCCGCTGTAAAAAGCAGGACC
TGGTGTCGGACGAAATTGCTACCCATATCGAAGCCGGTAAAGTCGTGACCAAACTGGCGCTCGACTGGCAGGAGCGCATT
CAGTTTGTTATCGCTGATGACGCTTCAGTGAAGCGCCTGAAATTCAGCGATACCCTGCGTGAGCAAAATGACGATATCGA
TCGTGATGATTTTGCTCAGCGTTTCGATGCTGATTTTATCCTGATGACCAGTGAACTGGCTGCGCTGATCAGCAATCTGG
TGGAAGCACTGGGCGGAGAAGCACAGCGTTAA

Protein sequence :
MLWFKNMMVYRLNRDIPLSADDLEKQLDAFTFSPCGSQDMAKTGWVSPMGNRSEALTHVVNGQIVICARTEQKILPSPVV
KQALEAKIDKLEAEQSRKLKKTEKDSLKDEVLHSLLPRAFSRFSQTFMWIDTVNNLIIVDCASAKKAEDTLALLRKSLGS
LPVVPLTLESPIELTLTEWVRSGQLPAGFTLMDEAELKALLEEGGVIRCKKQDLVSDEIATHIEAGKVVTKLALDWQERI
QFVIADDASVKRLKFSDTLREQNDDIDRDDFAQRFDADFILMTSELAALISNLVEALGGEAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 6e-80 61