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Name : Pat9b_0767 (Pat9b_0767) Accession : YP_004114647.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 895849 - 897999 bp Length : 2151 bp Strand : + Note : KEGG: eta:ETA_09070 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein DNA sequence : TTGAATATTCTTGCGATCATGGGACCGCACGGGGTTTTCTACAAAGATGAACCGATGCGTGAGTTGGATGCAGCATTGAA GCTGCAAGGCTTCCAGACCGTCTATCCCCACAATGCCAGTGACCTGCTGAAGCTGATTGAGCACAACCCCCGGGTGTGCG GCGTGGTTTTTGACTGGGATGATTACAGCTTGTCGCTTTGCAGCGATATCAATCAACTCAACGAATACCTGCCGCTGTAC GCGTTTATCAACACCCATTCACAATTGGATGTCAGCATCAATGAAATGCGCATGGCGCTGCATTTCTTCGAATATGCCCT GAGCGTAGCTGACGACATCGCGTTGCATATTCGCCAGTACACCGATGAATACATCGACAAAATCACCCCGCCGCTGACCA AAGCGTTATTTACCTATGTCAAAGAGGGCAAATACACCTTCTGCACCCCCGGCCATATGGGCGGGACGGCGTTCCAGAAA AGCCCGGTCGGCAGCTTGTTCTACGATTTTTTTGGCGCGAATACGCTGAAAGCGGATATCTCGATTTCGGTGACGGAGCT GGGTTCTCTGCTTGACCACACCGGCCCACATCTGGAAGCAGAAGAGTACGTCGCCCGCACCTTTGGTGCAGAGCAGAGTT ACATGGTGACCAATGGCACCTCGACTTCGAATAAGATCGTGGGGATGTATGCGGCACCCACGGGCAGCACGGTGCTGATT GACCGTAATTGCCATAAATCGCTGACCCATCTGCTGATGATGAGCGACATTATCCCGCTGTGGCTGAAGCCAACGCGTAA CGCGCTGGGCATTCTCGGCGGGATACCACAGCGGGAATTTACCCGTGACAGCATCCAGCACAAAGTCGACAACACACCGC GCGCCAGCTGGCCGGTGCATGCGGTGATCACCAACTCAACCTATGATGGCTTGCTGTATAACACCGAATATATCAAGCGG ACGTTAGATGTCCCGTCGATCCACTTTGACTCTGCCTGGGTACCCTATACCAATTTTCACCCGATCTATGACGGGAAAAG CGGCATGAGCGGCGATCGGGTGCCGGGCAAGGTGATCTATGAAACGCAATCGACGCACAAGCTGCTGGCGGCATTTTCCC AGGCTTCGCTGATTCATATCAAAGGGGACTACGACGAGCAGACCTTTAACGAAGCCTACATGATGCACACCACCACGTCG CCAAACTACGCGATTGTCTCGTCGATCGAGACAGCAGCGGCGATGCTGCGAGGCAATCCGGGGAAGCGTCTGATCAATCG TTCGGTAGAAAGAGCACTGCATTTCCGGCGTGAAATCCAGCGGTTGCGCGAAGAGTCAGACGGCTGGTTCTTCGATATCT GGCAGCCGGAGCAAGTGGATGAAGCGGAATGTTGGCCGATCCAACCCGGCGAGGAGGATTGGCACGGCTTTACCCAAGCC GATTGCGATCATATGTACCTTGATCCGATTAAGGTGACGATCCTGACGCCAGGGATGAGCGAGTTGGGTGTGATGACGGA AGAGGGGATTCCGGCGGCGCTGGTCGCGAAATTCCTCGACCAGCGCGGTGTGGTGGTGGAGAAAACCGGTCCGTATAACC TGCTGTTCCTGTTTAGCATTGGCATCGATAAAACCAAAGCGATGAGCGTGCTGCGTGGCCTGACCGAGTTTAAACGCGCC TACGATCTCAATCTGCGGGTGAAAAACATGCTGCCGGACCTCTACGCCGAAGATCCCGATTTTTACCGCAACATGCGTAT TCAGACGCTGGCGCAGGGGATTCATCAGCTGATCCTGCAACATGATTTGCCCCGTTTGATGCTCAAGGCGTTTGACGTGT TGCCGGAGATGAAGATGACCCCACACCAGGCCTTCCAGCAGCAGGTCAAGGGGCAGGTGGAAACGGTGGATATTCGTGAG TTAGTCGGGCGTATCTCTGCCAATATGATTTTGCCCTACCCGCCGGGCGTACCTTTGGTCATGCCGGGTGAGATGATTAC CGAGCAGAGCCGTGCGGTGCTCGATTTTCTGTTGATGCTCTGCACCATCGGACGGCACTATCCTGGCTTTGAGACGGACA TCCACGGTGCAACGCTGACCGAGGATGGGCGTTATCTGGTGCGGGTGTTAAAAGGCGAGAACGATCATTAA Protein sequence : MNILAIMGPHGVFYKDEPMRELDAALKLQGFQTVYPHNASDLLKLIEHNPRVCGVVFDWDDYSLSLCSDINQLNEYLPLY AFINTHSQLDVSINEMRMALHFFEYALSVADDIALHIRQYTDEYIDKITPPLTKALFTYVKEGKYTFCTPGHMGGTAFQK SPVGSLFYDFFGANTLKADISISVTELGSLLDHTGPHLEAEEYVARTFGAEQSYMVTNGTSTSNKIVGMYAAPTGSTVLI DRNCHKSLTHLLMMSDIIPLWLKPTRNALGILGGIPQREFTRDSIQHKVDNTPRASWPVHAVITNSTYDGLLYNTEYIKR TLDVPSIHFDSAWVPYTNFHPIYDGKSGMSGDRVPGKVIYETQSTHKLLAAFSQASLIHIKGDYDEQTFNEAYMMHTTTS PNYAIVSSIETAAAMLRGNPGKRLINRSVERALHFRREIQRLREESDGWFFDIWQPEQVDEAECWPIQPGEEDWHGFTQA DCDHMYLDPIKVTILTPGMSELGVMTEEGIPAALVAKFLDQRGVVVEKTGPYNLLFLFSIGIDKTKAMSVLRGLTEFKRA YDLNLRVKNMLPDLYAEDPDFYRNMRIQTLAQGIHQLILQHDLPRLMLKAFDVLPEMKMTPHQAFQQQVKGQVETVDIRE LVGRISANMILPYPPGVPLVMPGEMITEQSRAVLDFLLMLCTIGRHYPGFETDIHGATLTEDGRYLVRVLKGENDH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 72 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_0767 | YP_004114647.1 | lysine decarboxylase | VFG1670 | Protein | 0.0 | 63 |
