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Name : Pat9b_0679 (Pat9b_0679) Accession : YP_004114560.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 791371 - 792762 bp Length : 1392 bp Strand : - Note : PFAM: type II secretion system protein E; KEGG: eta:ETA_08010 hypothetical protein DNA sequence : ATGGAGAAGTCTGATGACATGTTAAAGGCGTTATGTCGGCGTCATAACGCGATAATTCTGCATCATGATGACACCTTACT GCGCGTGGCCGTGGCGGGTACACCTGAACCGGCACTGTTGGAAGCACTGCAATTCGCCAGTCAGTGTAAAGTTGAGGTGG AGTGCTGGCCCGCCGCGCGGGTTGAGCAACTCCTTCACGAGCCGGGCCGTGCTGATGATGCGCCGAGAGAACAGGCGGCG GTAGAATCCGCCATCAGCGCAGTGGAATATATTCTGTGCCAGGCAATACAACGCCGGGCATCTGATGTCCATTTTGAGCC ACAACATAACGCGTTGCGTGTCCGACTGCGTATTGATGGTGTGCTGCATAAGCTGGCGCAATTGCCTGATGCACAACCTG CTGCGGTGTTGGCCCGGTTGAAAATTCTCGGTGGGCTGGATATCGCTGAACGACGCTTGCCGCAGGATGGGCAATTTACC CAGGAGCTGGAAGGGAAAAATGTGGCCTTTCGTCTCTCCACGCTGCCCATCAGCCACGGTGAGAAGGCAGTTGTACGCTT AATGCAGAGTGAAAATAGCGCCATTGCGCTGGATAAGCTCGGCATGCCTGCCCTTCAGTTGCGTCAGTTCAGTAATGCGC TGGCGAAACCACAGGGGTTGATTCTGGTCACCGGCCCGACCGGTAGTGGCAAAACCTTCACCCTTTACAGCGGATTAAGT GCACTCAATGTGCCGGAAAAAAATGTCTGTAGTGTAGAAGACCCGGTGGAAATTCCGCTTACCGGTATCAACCAGACACA AATCCAGCCCCGTAGTGGACTGGATTTCAATTTGGTGCTGCGCGCCTTACTGCGTCAGGACCCGGACGTCATCATGGTTG GTGAGATACGCGATGCAGAAACGGCCGGGATTGCAGTCAAAGCCGCACAAACCGGTCACCTGGTACTCTCCACACTTCAT ACCAATTCAACCGCTGAAACGCTGACACGGCTGCGGCAAATGGGGATTCCGGGTTATCTGCTTGGCCCGGCGCTGCAGCT TATTGTTGCGCAACGTCTGGTAAGACGGCTATGCGTGCATTGCCGCCAACCGGGGCAAGCTATCGCTCACCTGCCCAGCG AATTATGGCCGGGCACCCTACAGACCTGGCGAGCACCGGGCTGCGACCACTGCTTTTCTGGCTACTATGGGCGGCTGGCG CTTTTCGAACTCTTGCCCATGACGGCCAAATTGCAGAATGCCATTTCAGCGGATATGCCACTGGAGCATCTGCTGTCACT GGCGAACCAGCAGGGAATGAAGACACTGGTGGCTGCTGGACTGGAGGCCGTCAGTCGCGGAGAGACCTCGCTGGAAGAGA TGCAGCGCGTGATTGGGTTAGATAATGGCTAA Protein sequence : MEKSDDMLKALCRRHNAIILHHDDTLLRVAVAGTPEPALLEALQFASQCKVEVECWPAARVEQLLHEPGRADDAPREQAA VESAISAVEYILCQAIQRRASDVHFEPQHNALRVRLRIDGVLHKLAQLPDAQPAAVLARLKILGGLDIAERRLPQDGQFT QELEGKNVAFRLSTLPISHGEKAVVRLMQSENSAIALDKLGMPALQLRQFSNALAKPQGLILVTGPTGSGKTFTLYSGLS ALNVPEKNVCSVEDPVEIPLTGINQTQIQPRSGLDFNLVLRALLRQDPDVIMVGEIRDAETAGIAVKAAQTGHLVLSTLH TNSTAETLTRLRQMGIPGYLLGPALQLIVAQRLVRRLCVHCRQPGQAIAHLPSELWPGTLQTWRAPGCDHCFSGYYGRLA LFELLPMTAKLQNAISADMPLEHLLSLANQQGMKTLVAAGLEAVSRGETSLEEMQRVIGLDNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-67 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-67 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_0679 | YP_004114560.1 | type II secretion system protein E | VFG2426 | Protein | 3e-77 | 48 |
| Pat9b_0679 | YP_004114560.1 | type II secretion system protein E | VFG0112 | Protein | 1e-81 | 48 |
| Pat9b_0679 | YP_004114560.1 | type II secretion system protein E | VFG2048 | Protein | 2e-68 | 43 |
| Pat9b_0679 | YP_004114560.1 | type II secretion system protein E | VFG0182 | Protein | 1e-66 | 43 |
| Pat9b_0679 | YP_004114560.1 | type II secretion system protein E | VFG1876 | Protein | 4e-70 | 43 |
