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Name : Pat9b_0051 (Pat9b_0051) Accession : YP_004113936.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 55548 - 56870 bp Length : 1323 bp Strand : + Note : TIGRFAM: xylose isomerase; KEGG: sbc:SbBS512_E3959 xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel DNA sequence : ATGCACGCCTATTTCGACCAGCTTGATCGCGTTCGCTATGAAGGGACCAACACCCACAATCCTCTGGCGTTCCGTCACTA CAATCCTGATGAAGTGATCCTCGGCAAAACCATGGCCGAGCATCTGCGTTTTGCCGCCTGCTACTGGCATACCTTCTGCT GGAACGGTGCGGATATGTTTGGTGTCGGCGCTTTTGATCGCCCCTGGCAGAAGAATGGTGATGCGCTTGAGCTGGCGAAA CAGAAGGCAGATGTGGCTTTTGAGTTTTTTCATAAGCTGAATGTGCCTTACTACTGCTTCCATGATGTTGATGTTTCACC GGAAGGTGACTCGCTGAAAACCTATCGCGACAACTTTGCGGTGATGACCGATAAACTGCTGGAAAAACAGCAGGAAACCG GGGTGAAGCTGTTGTGGGGTACTGCCAACTGCTTTACCCATCCCCGCTATGGCGCGGGTGCCGCCACCAACCCGGACCCG GAAATTTTTGCCTGGGCCGCCAGTCAGGTGTGCAGCGCCATGCAGGCCACGCAAACCCTTGGTGGCGAAAACTATGTGTT ATGGGGTGGCCGTGAAGGCTATGAAACCCTGCTGAATACCGATCTGCGCCAGGAACGTGAGCAAATTGGCCGCTTTATGC AGATGGTGGTAGAGCATAAACACAAAATTGGCTTCCAGGGCATGTTGCTGATTGAGCCAAAACCGCAGGAACCGACCAAA CATCAATATGATTATGATGTGGCAACGGTATATGGCTTCCTGAAGCAGTTTGGCCTGGAGAAAGAGATTAAAGTCAACGT GGAAGCCAACCATGCCACGCTGGCTGGTCACTCGTTCCACCATGAAATTGCCACCGCCATCGCGCTGGGAATTTTTGGTT CGGTGGATGCCAACCGGGGAGATATCCAGTGTGGCTGGGATACCGACCAGTTCCCGAACAGCGTTGAAGAAAACGCGCTG GTCATGTACGAGATTATCAAAGCGGGCGGATTCACCACCGGCGGCTTAAACTTTGATGCCAAAGTGCGGCGTCAAAGCAC CGACAAATACGATCTTTTTTACGGTCACATTGGCGCGATGGATACGATGGCGCTGGCATTGAAAGTGGCAGCACGGATGG TGGCCGATGGCGAGCTGGATAAGCGTGTGGCGCAGCGCTACAGCGGCTGGAACGGTGAATTTGGGCAGCAAATCCTGAAA GGGGAATTCTCCCTCGCATCGCTGGCACAGCAGGCGCAGCAGCAGCAATTCAATCCACAGCACCGCAGTGGACGCCAGGA GCAGCTGGAAAACCTGGTGAATCACTACCTTTTTGATTTTTAA Protein sequence : MHAYFDQLDRVRYEGTNTHNPLAFRHYNPDEVILGKTMAEHLRFAACYWHTFCWNGADMFGVGAFDRPWQKNGDALELAK QKADVAFEFFHKLNVPYYCFHDVDVSPEGDSLKTYRDNFAVMTDKLLEKQQETGVKLLWGTANCFTHPRYGAGAATNPDP EIFAWAASQVCSAMQATQTLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVEHKHKIGFQGMLLIEPKPQEPTK HQYDYDVATVYGFLKQFGLEKEIKVNVEANHATLAGHSFHHEIATAIALGIFGSVDANRGDIQCGWDTDQFPNSVEENAL VMYEIIKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKVAARMVADGELDKRVAQRYSGWNGEFGQQILK GEFSLASLAQQAQQQQFNPQHRSGRQEQLENLVNHYLFDF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 7e-98 | 51 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 5e-98 | 51 |
