Gene Information

Name : Pat9b_0491 (Pat9b_0491)
Accession : YP_004114372.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 570277 - 571077 bp
Length : 801 bp
Strand : +
Note : KEGG: similar to CG10226 CG10226-PA; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGACCGAAATCTCCAGCCGTCTTTATGGCGAAGGGTTGACGCTGGGTTACGACAAAAAAGTGGTGGCAGAAAATTTGTC
GGTGGCGATACCGGAAGGGGAGCTGACGGTGATTATCGGCCCGAACGCCTGCGGCAAATCAACCCTGCTACGCACCCTGA
GTCGTCTGAATACGCCGTTGAAAGGTCAGGTGTTTTTGGATGGGGAAGCCATTGCACGCTATCCCACGAAAGAAGTGGCA
CGCCGTCTTGGCCTGTTGCCACAAAGTTCTAACGCACCCGCTGGCATCAGCGTGACTGAGCTGGTGGCGCGTGGACGCTA
TCCACATCAGGCGCTGTTTGGCCGCTGGCGCGCTGAAGATGAGCAGGCGGTACAGCAGGCGATGCTGGCAACCGGCGTCT
CGGATCTCGCCGATCAACAGGTGGATACCTTGTCGGGTGGTCAGCGCCAGCGCGTATGGATTGCGATGGTGCTGGCGCAG
CAAACGCCGCTGTTGTTACTGGACGAGCCGACGACCTGGCTGGATATCACCCATCAGATTGAATTGCTGGAATTGATGCA
GGATCTCAATCAACAGCACGGTCGCTCGTTGGTGGTGGTCCTGCATGACCTGAATCATGCCTGTCGTTACGCCACGCACC
TGATTGCCATGCGCCATGGCCGGATTATTGCGGAAGGGAAACCGGCAGAGATTGTCACGCCCGCACTGATTGAGCAGGTG
TATGGTTTGCGCTGCGTGATTGTGGAAGACCCGGTGGCACACACGCCCATGATTGTGCCGCTGGGGCGGCCAAAAACATA
A

Protein sequence : 
MTEISSRLYGEGLTLGYDKKVVAENLSVAIPEGELTVIIGPNACGKSTLLRTLSRLNTPLKGQVFLDGEAIARYPTKEVA
RRLGLLPQSSNAPAGISVTELVARGRYPHQALFGRWRAEDEQAVQQAMLATGVSDLADQQVDTLSGGQRQRVWIAMVLAQ
QTPLLLLDEPTTWLDITHQIELLELMQDLNQQHGRSLVVVLHDLNHACRYATHLIAMRHGRIIAEGKPAEIVTPALIEQV
YGLRCVIVEDPVAHTPMIVPLGRPKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-59 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-59 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-59 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-59 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-48 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-57 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-59 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-59 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-48 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_0491 YP_004114372.1 ABC transporter-like protein BAC0164 Protein 2e-48 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_0491 YP_004114372.1 ABC transporter-like protein VFG0925 Protein 8e-87 69
Pat9b_0491 YP_004114372.1 ABC transporter-like protein VFG1042 Protein 1e-48 48