Gene Information

Name : Pat9b_0490 (Pat9b_0490)
Accession : YP_004114371.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4779
EC number : -
Position : 569309 - 570280 bp
Length : 972 bp
Strand : +
Note : PFAM: transport system permease protein; KEGG: cko:CKO_02572 iron-enterobactin transporter permease

DNA sequence : 
ATGACCCGACGCGTCATGTTTCATACCTGCTGGCTACTGCTGGGTTGTGGGTTGATCGCATTCCTGGCAATGACGCGGGG
AACCTTACCGCTCAGTGGGGAACAAATCTGGCAGGTGCTGCTGGGACAGGGTGCCAGCAATGTCAAACTGATCGTGCTGG
AGTGGCGTTTACCACGAGTACTGATGGCGTTGCTGATTGGTGCCGCGCTGGGCGTAAGTGGTGCGATTTTCCAGTCCTTG
CTACGTAATCCGTTGGGTAGCCCGGATATCCTTGGCTTTAACACTGGAGCCTACAGCGGCGTGCTGGTGGCGCTGGTGCT
GTTCAACCAGAGCGCCTCAGCGATCACGATGGCCGCATTGATCGGTGGCATTGCCACTGCCGCGTTGGTCTACTTGTTTG
CCTGGCGCAACGGTGTGGAAACCTTCCGTTTGATTATCGTCGGCATCAGCGTGCGCGCGCTGTTAATGGGGCTGAACAGT
TGGTTGATTATCAGTGCCTCACTGGATGCGGCCCTCAGTGCCGGTTTGTGGAGCGCCGGTACGCTTAACGGTATCACCTG
GAACAAGACGCCGCCGGTGATCGCCGCGTTGCTGGTGGCGCTGCTGTTGGTGGCGTTGCTGGCACGGCGCATGCGTTTGC
TGGAGATGGGCGATGATACCGCCAGCGCCCTCGGCGTGCCGGTGGAGCGTAGCCGTCTGTGGCTGATGCTGCTGGGGGTG
GTGCTGATCGCCGCCTCCACGGCGCTGGTCGGCCCGATCTCCTTTGTGGCGCTCCTCGCACCGCAGATTGCGCGTCGCCT
CGGTGGCGGCATGCCGCTGGCGGCGCTGTGTGGTGCGCTGTTGCTGATCGCTGCCGATTTCGCCGCGCAGCATCTGTTCC
TGCCTTATCAATTGCCGGTGGGCGTGATTACCGTCAGCCTCGGCGGCCTTTATCTGATTGCTTTACTGGTGCGGGAGGCA
CGACGCCAATGA

Protein sequence : 
MTRRVMFHTCWLLLGCGLIAFLAMTRGTLPLSGEQIWQVLLGQGASNVKLIVLEWRLPRVLMALLIGAALGVSGAIFQSL
LRNPLGSPDILGFNTGAYSGVLVALVLFNQSASAITMAALIGGIATAALVYLFAWRNGVETFRLIIVGISVRALLMGLNS
WLIISASLDAALSAGLWSAGTLNGITWNKTPPVIAALLVALLLVALLARRMRLLEMGDDTASALGVPVERSRLWLMLLGV
VLIAASTALVGPISFVALLAPQIARRLGGGMPLAALCGALLLIAADFAAQHLFLPYQLPVGVITVSLGGLYLIALLVREA
RRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagB YP_005682398.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 9e-35 47
fagB YP_003782431.1 integral membrane protein Not tested PiCp 1 Protein 9e-35 47
fagB YP_005684489.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 9e-35 47
fagB YP_005680308.1 Iron-enterobactin transporter Virulence PiCp 1 Protein 6e-35 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_0490 YP_004114371.1 transporter permease VFG0928 Protein 6e-54 63