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Name : Pat9b_3941 (Pat9b_3941) Accession : YP_004117787.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : - Position : 4300098 - 4301507 bp Length : 1410 bp Strand : + Note : KEGG: eta:ETA_00300 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp DNA sequence : ATGTCCGCTGAACACGTTCTCTCGATGATGAACGAGCACGAAGTTAAGTTTGTTGACCTGCGTTTTACCGATACCAAAGG TAAAGAACAGCACGTTACTATCCCTGCTCACCAGGTTAACGCTGACTTCTTCGAAGAAGGCAAAATGTTCGATGGCTCCT CCATCGGTGGCTGGAAAGGCATTAACGAATCAGACATGGTGCTGATGCCGGACGCAACCACTGCCGTTCTGGACCCGTTC TTCGAAGATCCGACGCTGATCATCCGTTGTGACATCCTTGAGCCAGGCACCATGCAGGGCTACGATCGCGACCCGCGTTC AATCGCCAAGCGCGCAGAAGATTTCCTGCGTTCTTCTGGTATCGCGGATACCGTTCTGTTCGGACCTGAGCCGGAATTCT TCCTGTTCGATGACATCCGTTTCGGTTCTTCAACTTCTGGTTCACACGTTGCTATCGACGATATCGAAGCAGCCTGGAAC ACCGGTAAAGAATACGAAGGTGGCAACAAAGGTCACCGTCCGGCTATCAAAGGTGGTTACTTCCCGGTTCCGCCGGTTGA CTCAGCTCAGGACATCCGTTCTGCCATGTGTCTGACCATGGAGCAGATGGGTCTGGTGGTTGAAGCGCATCACCACGAAG TAGCAACTGCTGGTCAGAACGAAGTGGCTACCCGCTTCAACACCATGACCAAAAAAGCTGACGAAATTCAGATCTACAAA TACGTTGTTCACAACGTTGCTCACGCTTACGGCAAAACTGCAACCTTCATGCCGAAGCCAATGTTCGGTGACAACGGTTC AGGTATGCACTGCCACATGTCTCTGTCTAAAGGCGGCGTGAACCTGTTCTCTGGCGACAAATACGGCGGCCTGTCTGAAA CTGCTCTGTTCTACATCGGCGGTATCATCAAGCACGCTAAAGCCATCAACGCCCTGGCTAACCCGACCACCAACTCTTAT AAGCGTCTGGTCCCAGGCTACGAAGCACCGGTAATGCTGGCTTACTCTGCCCGTAACCGTTCTGCTTCAATCCGTATCCC GGTTGTTGCCAGCCCGAAAGCGCGTCGTATCGAAGCTCGCTTCCCGGACCCGGCTGCTAACCCGTACCTGGCATTCACCG CACTGCTGATGGCTGGCCTCGACGGCATCATCAACAAGATCCACCCTGGCGATGCGATGGACAAAAACCTGTACGACCTG CCGCCGGAAGAAGAAGCTGAGATTCCAAAAGTGGCGGGTTCACTGGAAGAAGCGCTGAACTGCCTGAACGAAGACCGCGA GTTCCTGACCCGTGGTGGCGTGTTCACCGACGACGCTATCGACGCGTACATCGAACTGCGTAAGTCTGAAAATGACCGCG TTCGCATGACTCCGCACCCGGTAGAGTTCGAGCTGTACTACAGCGTGTAA Protein sequence : MSAEHVLSMMNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNADFFEEGKMFDGSSIGGWKGINESDMVLMPDATTAVLDPF FEDPTLIIRCDILEPGTMQGYDRDPRSIAKRAEDFLRSSGIADTVLFGPEPEFFLFDDIRFGSSTSGSHVAIDDIEAAWN TGKEYEGGNKGHRPAIKGGYFPVPPVDSAQDIRSAMCLTMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYK YVVHNVAHAYGKTATFMPKPMFGDNGSGMHCHMSLSKGGVNLFSGDKYGGLSETALFYIGGIIKHAKAINALANPTTNSY KRLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEARFPDPAANPYLAFTALLMAGLDGIINKIHPGDAMDKNLYDL PPEEEAEIPKVAGSLEEALNCLNEDREFLTRGGVFTDDAIDAYIELRKSENDRVRMTPHPVEFELYYSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 6e-99 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_3941 | YP_004117787.1 | glutamine synthetase | VFG1399 | Protein | 6e-114 | 50 |
