Gene Information

Name : Pat9b_3851 (Pat9b_3851)
Accession : YP_004117697.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 4207065 - 4208438 bp
Length : 1374 bp
Strand : -
Note : KEGG: eta:ETA_01370 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase

DNA sequence :
ATGGCACTTTGGGGTGGACGCTTTACCCAGGCAGCAGACCAACGGTTCAAACAATTCAATGACTCGCTGCGTTTCGACTA
TCGCCTGGCAGAGCAGGACATCATCGGTTCTGTCGCTTGGTCAAAAGCGCTGGTTACGGTCAATGTACTGAGCAGCGACG
AACAGCAGCAGCTGGAAGCCGCATTGCAGGCATTGCTGGCTGAAGTGCGTGCGAATCCGCAGCAGATTCTGCAAAGTGAT
GCCGAAGATATCCACAGTTGGGTCGAAGGCAAGCTGATCGACAAAGTCGGTGCGTTAGGTAAAAAGCTGCATACTGGCCG
TAGCCGCAACGACCAGGTCGCGACCGATCTGAAACTGTGGTGCAAAGAGCAGGTTGCGGTGCTGCTGGATGCCACGCGTG
AGCTGCAAAAAGCGTTGGTTGTTACCGCAGAAGCCAATCAGGATGCAGTGATGCCGGGTTATACCCACCTGCAACGCGCC
CAGCCGGTGACCTTTGCGCACTGGTGTCTCGCCTATGTCGAAATGCTGGCGCGTGATGAAAGCCGTTTACAGGATACGCT
GAAGCGCCTCGACGTCAGCCCACTGGGTTGCGGCGCGCTGGCGGGTACGGCCTACGAGATCGATCGTCAGCAACTGGCGG
GCTGGTTAGGCTTCGCCTCTGCCACCCGTAACAGCCTTGATACCGTTTCTGACCGCGATCACGTGCTGGAGCTGCTGTCT
GATGCCTCGATCGGCATGGTGCATCTGTCGCGCTTTGCTGAAGACATGATTTTCTTCAACACCGGTGAAGCGGGCTTTGT
CGAGCTGTCGGACAAAGTGACTTCCGGTTCCTCACTGATGCCGCAGAAGAAAAACCCGGATGCGCTGGAGCTGATCCGTG
GCAAATGTGGCCGTGTGCAGGGTGCACTGACCGGCATGATGATGACGCTGAAAGGCTTGCCGCTGGCGTACAACAAAGAT
ATGCAGGAAGACAAAGAAGGGCTGTTTGACGCGCTCGACACCTGGCTGGACTGTCTGCATATGTCGGTACTGGTGCTGGA
TGGCATCCAGGTGAAACGTCCGCGCTGCCAGGAAGCGGCAGAGCAGGGTTATGCCAACTCTACCGAGCTGGCGGATTACC
TGGTCGCTAAAGGCGTGCCGTTCCGCGAAGCACACCATATCGTTGGTGAAGCGGTGGTGGAAGCGATTAAGCAGGGCGTA
GCGCTGGAAGCGTTAAGCCTGGCGCAACTGCAGCAGTTCAGCGCGACGATTGAAGAAGATGTCTATCCGATTCTGTCACT
GCAATCGTGCCTGGATAAGCGTAACGCCCGTGGTGGCGTGGCACCTCAGCAGGTCGCGCTGGCGATTCAGGAAGCGCAGC
AGCGTCTGAAATAA

Protein sequence :
MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIIGSVAWSKALVTVNVLSSDEQQQLEAALQALLAEVRANPQQILQSD
AEDIHSWVEGKLIDKVGALGKKLHTGRSRNDQVATDLKLWCKEQVAVLLDATRELQKALVVTAEANQDAVMPGYTHLQRA
QPVTFAHWCLAYVEMLARDESRLQDTLKRLDVSPLGCGALAGTAYEIDRQQLAGWLGFASATRNSLDTVSDRDHVLELLS
DASIGMVHLSRFAEDMIFFNTGEAGFVELSDKVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKD
MQEDKEGLFDALDTWLDCLHMSVLVLDGIQVKRPRCQEAAEQGYANSTELADYLVAKGVPFREAHHIVGEAVVEAIKQGV
ALEALSLAQLQQFSATIEEDVYPILSLQSCLDKRNARGGVAPQQVALAIQEAQQRLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 1e-81 48
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 1e-81 48