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Name : Pat9b_0039 (Pat9b_0039) Accession : YP_004113925.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Resistance Product : AraC family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG2207 EC number : - Position : 41642 - 42040 bp Length : 399 bp Strand : + Note : KEGG: spe:Spro_1523 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain DNA sequence : ATGGATATCAACGTGGCCTTCATACATCAGTTGCTGCTCTGGATTGAAGCGAATATCGAGCAAAAACTGATTCTGGAAAC TGTTGCTCAGCGGGCGGGGTATTCGCAGTGGCATCTGCAACGTTTGTTCCGTAGCTATACCGGCATTGCGCTGGGAAGCT ATATTCGCGAAAGGAAGTTAACGGCATCGGTGATAGCGTTGTTAACCGACAACACTCCTCTGATGCATATTGCGTTGCAG TTTGGCTTTGATTCACAGCAGACCTACTGCCGCACCTTTCGCCGTATGTTTAACCTGCCGCCAGGTGCCTTCCGCCGTAA GTATCAGCACAGCCTGCCGCCTATTGATGGACCGGCTAGCCTGTTGATGCTGCGTCCGCATGGTCAGCCGCAGCCGTAA Protein sequence : MDINVAFIHQLLLWIEANIEQKLILETVAQRAGYSQWHLQRLFRSYTGIALGSYIRERKLTASVIALLTDNTPLMHIALQ FGFDSQQTYCRTFRRMFNLPPGAFRRKYQHSLPPIDGPASLLMLRPHGQPQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| soxS | YP_219131.1 | DNA-binding transcriptional regulator SoxS | Not tested | SPI-4 | Protein | 2e-21 | 43 |
| tetD | AAL08447.1 | putative transcriptional regulator TetD | Not tested | SRL | Protein | 2e-23 | 43 |
| tetD | AEA34665.1 | tetracycline resistance protein D | Not tested | Not named | Protein | 2e-23 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | CP000647.1.gene1624. | Protein | 1e-22 | 52 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | CP001138.1.gene612.p | Protein | 2e-24 | 49 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | CP001918.1.gene2033. | Protein | 2e-22 | 49 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | NC_002695.1.917339.p | Protein | 2e-22 | 48 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | CP001138.1.gene1637. | Protein | 2e-22 | 48 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | BAC0560 | Protein | 2e-22 | 48 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | CP000034.1.gene1596. | Protein | 1e-22 | 48 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | CP000647.1.gene4499. | Protein | 7e-21 | 43 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | NC_002695.1.914293.p | Protein | 1e-22 | 43 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | CP001138.1.gene4488. | Protein | 6e-22 | 43 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | BAC0371 | Protein | 1e-22 | 43 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | CP000034.1.gene4505. | Protein | 4e-22 | 43 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | NC_010558.1.6276025. | Protein | 1e-23 | 43 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | CP001918.1.gene327.p | Protein | 1e-20 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | VFG0585 | Protein | 5e-22 | 43 |
| Pat9b_0039 | YP_004113925.1 | AraC family transcriptional regulator | VFG1038 | Protein | 1e-23 | 43 |
