Gene Information

Name : Pat9b_3782 (Pat9b_3782)
Accession : YP_004117628.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : K+-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : -
Position : 4123178 - 4125226 bp
Length : 2049 bp
Strand : -
Note : KEGG: eta:ETA_33640 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydro

DNA sequence :
ATGAGTCGTCAACAACTGGCCCTGTTTGATGCGCGGCTGACGCGTGTCGCGATGCTGGATGCGGTGAAAAAACTCGATCC
ACGCGTCCAGTTTCGTAACCCGGTGATGTTTCTGGTGTGGCTCGGTAGCGTGCTCACCAGCGTGCTTGCGATCGGCATGG
CCGCAGGGCAATTGAACGGTAGCGCCGGTTTTACCGCCGGGGTTGCCATCTGGTTGTGGTTTACCGTGCTGTTTGCCAAC
TTCGCAGAAGCGCTGGCAGAAGGGCGCAGCAAAGCGCAGGCCAACAGCCTGAAAGGGGTGAAAAAAAGCGTCGATGCGAA
AAAGCTGGCGGAGCCGCATTACGGAGCCGCGTGGAAAAACGCCTCGGCGGATAGCCTGCGCAAAGGCGATGTGGTGCTGG
TGGAAGCGGGTGACATTATTCCGTGCGATGGCGAAGTGCTGGAAGGGGGCGCGTCAGTGGACGAAAGCGCCATTACCGGC
GAATCGGCCCCGGTGATCCGTGAGTCCGGCGGTGACTTCGCCTCGGTGACCGGCGGTACGCGCATTCTTTCTGACTGGCT
GGTCATTCAGTGCAGCGTCAATCCGGGGGAAACCTTCCTTGATCGCATGATCGCTATGGTGGAAGGCGCTAAACGCCGTA
AAACCCCGAACGAAATCGCGCTGACCATTCTGTTGGTGTCGCTCACCATCGTGTTCCTGCTGGCGACCGTGACCCTGTGG
CCGTTCTCCGCCTGGGGCGGAACCCCGGTCAGTGTCACGGGGTTGGTGGCGCTGCTAGTATGTCTGATCCCCACCACCAT
TGGTGGTTTGTTGTCGGCGATTGGCGTGGCGGGGATGAGCCGCATGCTCGGCGCGAATGTGATCGCCACCAGTGGCCGTG
CGGTAGAAGCGGCGGGCGACGTGGATGTGTTGATGCTGGACAAAACCGGCACCATCACCTTGGGCAACCGTCAGGCGACG
CAGTTCCTGCCTGCTCCCGGCGTCAGCGAACAGCAATTGGCCGATGCGGCGCAGCTCGCCTCGTTGGCGGATGAGACACC
GGAAGGGCGCAGTATCGTGGTGCTGGCGAAGCAGAAATTTAATCTGCGTGAGCGCGATCTCAGCAGCATGGGTGCCAGCT
TTATCCCGTTCTCGGCGCAAACACGGATGAGTGGCGTGAATGTGCAGGATCGCCTGATCCGCAAAGGGGCGGTGGATGCG
GTGCGTCGCCACATTGAAGCCAGCAATGGCCGCTTCCCGGCTGAGGTGAATGCGGCGGTGGAAGAGGTGGCGCGTGCCGG
TGGCACGCCGTTGGTGGTGGCGGAAGGTGCTCAGGTGCTGGGCGTGGTGGCGCTGAAAGATATCGTTAAAGGTGGCATCA
AAGAGCGTTTTGCCGAGCTGCGCAAAATGGGGATCAAAACCGTGATGATCACCGGCGATAACCCATTAACCGCCGCTGCG
ATTGCGGCAGAAGCGGGTGTGGATGATTTCCTCTCGGAAGCGACCCCGGAAGCCAAGCTGGCGCTGATCCGCCAGTATCA
GGCGGAAGGGCGACTGGTGGCGATGACCGGCGATGGCACTAACGATGCTCCGGCGCTGGCGCAGGCCGACGTGGCGGTGG
CGATGAACTCCGGCACCCAGGCGGCAAAAGAGGCGGGAAATATGGTCGATCTCGACTCCAACCCGACCAAGCTGTTGGAA
GTGGTGCATATCGGTAAACAGATGCTGATGACGCGTGGTTCGCTGACCACCTTCAGTATCGCCAACGATGTGGCGAAATA
CTTCGCCATCATCCCGGCAGCGTTTGCCGCCACCTATCCGCAGCTCAACATGCTGAACGTGATGCAGCTGCACTCCCCCA
ACTCCGCGATTTTGTCGGCGGTGATTTTTAACGCGCTGGTGATTGTGTTCCTGATCCCGCTGGCGCTGAAAGGCGTGAGC
TACCGTCCGCTGAGTGCCGCCGCGTTGCTGCGGCGCAACCTGTGGATTTACGGGGTGGGTGGGCTGGTGGTGCCGTTTAT
CGGCATCAAAGCGATTGATGTGCTGCTGACCTTGTTGGGTCTGGCGTAA

Protein sequence :
MSRQQLALFDARLTRVAMLDAVKKLDPRVQFRNPVMFLVWLGSVLTSVLAIGMAAGQLNGSAGFTAGVAIWLWFTVLFAN
FAEALAEGRSKAQANSLKGVKKSVDAKKLAEPHYGAAWKNASADSLRKGDVVLVEAGDIIPCDGEVLEGGASVDESAITG
ESAPVIRESGGDFASVTGGTRILSDWLVIQCSVNPGETFLDRMIAMVEGAKRRKTPNEIALTILLVSLTIVFLLATVTLW
PFSAWGGTPVSVTGLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLMLDKTGTITLGNRQAT
QFLPAPGVSEQQLADAAQLASLADETPEGRSIVVLAKQKFNLRERDLSSMGASFIPFSAQTRMSGVNVQDRLIRKGAVDA
VRRHIEASNGRFPAEVNAAVEEVARAGGTPLVVAEGAQVLGVVALKDIVKGGIKERFAELRKMGIKTVMITGDNPLTAAA
IAAEAGVDDFLSEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLLE
VVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNMLNVMQLHSPNSAILSAVIFNALVIVFLIPLALKGVS
YRPLSAAALLRRNLWIYGVGGLVVPFIGIKAIDVLLTLLGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-174 63
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 8e-175 63
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 7e-150 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-148 54
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-148 54
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-148 54
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 4e-148 54
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-148 54