Name : Pat9b_0359 (Pat9b_0359) Accession : YP_004114241.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Resistance Product : AraC family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG2207 EC number : - Position : 430152 - 430520 bp Length : 369 bp Strand : + Note : KEGG: spe:Spro_3482 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain DNA sequence : ATGAATCAGAGTCAATTTATCCGTAGTTTGCTGGACTGGATAGAAGACAACTTAGGACACGATTTGCATCTGGATGAGGT AGCACGCCGTTCCGGGTATTCCCGCTGGCATCTGCAACGTCTGTTTCGACAGCACACCGGATTTTCACTGGCCGAATACA TTCGCCAGCGCCGGTTGACGGAATCGGCGTTGACGCTACTGAACAGTGATGAGGCGATCCTGCAGGTGGCGATGAGCTAC GGCTTCGACACGCAGCAGGCTTATACCCGCACCTTTAAAAACTATTTTCGTGTCACCCCGGGTCAGTTGCGTCGTCAGCG CCGCGTTGAACCGGATCGTCTGCTGTTTCCGCTGGCGGTGGCCAGTTGA Protein sequence : MNQSQFIRSLLDWIEDNLGHDLHLDEVARRSGYSRWHLQRLFRQHTGFSLAEYIRQRRLTESALTLLNSDEAILQVAMSY GFDTQQAYTRTFKNYFRVTPGQLRRQRRVEPDRLLFPLAVAS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tetD | AAL08447.1 | putative transcriptional regulator TetD | Not tested | SRL | Protein | 6e-23 | 48 |
tetD | AEA34665.1 | tetracycline resistance protein D | Not tested | Not named | Protein | 6e-23 | 48 |
soxS | YP_219131.1 | DNA-binding transcriptional regulator SoxS | Not tested | SPI-4 | Protein | 8e-21 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | CP001918.1.gene2033. | Protein | 1e-26 | 56 |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | CP000647.1.gene1624. | Protein | 2e-25 | 54 |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | NC_002695.1.917339.p | Protein | 3e-26 | 54 |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | BAC0560 | Protein | 3e-26 | 54 |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | CP000034.1.gene1596. | Protein | 2e-26 | 54 |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | CP001138.1.gene1637. | Protein | 6e-26 | 52 |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | NC_010558.1.6276025. | Protein | 3e-23 | 48 |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | CP001138.1.gene612.p | Protein | 3e-23 | 43 |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | CP001138.1.gene4488. | Protein | 3e-21 | 42 |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | CP001918.1.gene327.p | Protein | 7e-21 | 42 |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | CP000647.1.gene4499. | Protein | 1e-20 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | VFG1038 | Protein | 2e-23 | 48 |
Pat9b_0359 | YP_004114241.1 | AraC family transcriptional regulator | VFG0585 | Protein | 2e-21 | 42 |