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Name : Pat9b_0340 (Pat9b_0340) Accession : YP_004114222.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Unknown Product : capsular exopolysaccharide family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3206 EC number : 2.7.10.2 Position : 404095 - 406281 bp Length : 2187 bp Strand : - Note : TIGRFAM: capsular exopolysaccharide family; KEGG: spe:Spro_1585 non-specific protein-tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein DNA sequence : ATGACAACTACGATTAAACATAAAATTGTCACCGCGAAATCAGAAGAAATCGATTTGGGGCGCATTTACGGTGGATTACT CGATCATCGTAAATTAATTATTGGGGTGACCAGCGTCGTCACTCTGCTTGCTATTATTTATGCGTTGTTCATCACGCCGG TTTATCAGGCGAATGCGATGATTCAGATTGAGCAGAAACAAGGGAATGCACTGCTTAATGACATCAGCCAAATACTGCCA GATACGCAGCCGGTTGCCGCACCTGAGATCGCTTTGCTGCAATCGCGCATGATCCTCGGCAAGACCGTGAGTGATTTAAA CTTACAGGCCGTTATCAGTCAGAAATATTTTCCGCTGTTCGGCCAGGGTTGGGCAAGGTTGACGGGAGAAGTGCCGGGGA AACTCAGCATTAATCAATTGTATCTGCCCCGCACAGATGATAAATCCCCGCGCATTACGTTGACGGTTGTGGATCAGGAT CGCTTTCTCGTCGATCACGATAATGTTCAGTTCTATGGCAAAGTGGGTAGCCCCATCACCCGTGATGGCATGTTATTGAA TGTCGACAGCATGCATGCCCAACCGGGTACGCAATTTATCGTGAAATATATCTCGCGTCAGGCGGCCATTGCCAGTCTGC TGGATAGCTTCGATGTCGAGGATCAGGGCAAGAAAACCGGGCTGCTGTTGCTGACGTTGAGCAATGAAGACAAGGCCAGT GCCGCAACGATTCTGAATGTTATCAGCGAGAACTATTTAGAGCAGAACGTTGCCCGGCAAAGGGCTGAAGATACCAATAG CCTTGATTTTCTGCATCAGCAACTGCCGCAGGTACGCCGCGACCTTGATGCCGCAGAAGATAAAATGAATCTGTATCGTC GTCAGAAAGACTCGGTGGATTTGTCACTGGAAACCAAGGCGGTACTTGATCAGGTGGTGAATATTGATACGCAGCTGAAT GAATTGACTTTCCGTGAAGCTGAAATTGCGCAGTTATATACCCAAGATCACCCGACTTATAAAACCTTGCTGGAAAAGCG TCAGACCTTATTACAGGCGCGCGATAACCTGAATAAGCGTATTGCCGCGCTGCCTGCAACGCAACAGGAAGTGGAACGCC TGAGCCTTGATGTCGACGCCGGGCGTGCGATCTATATGCAGCTGCTTAACCGTCAGCAAGAGCTGGGCATAGCCAAATCA AGCATCATCGGCAATGTGCACATTATTGATACGGCGGTGACACAACCGTCGCCTATTCTGCCGAACAGACCACAGATGGT GGCAACAGGTCTGGTGGCGGGGCTTATGTTATCGCTCATCCTGGTTGCCGGAAAAATGCTATTGCGCAGGACAATAGAAT CGGCTGAGCAACTGGAAAACATGGGTGTGAGTGTTTATGCCAGCGTACCGGTGTCCGAATGGCTAAATAAACAAAATGTC AGCACGAACACCAAACGCTTCGGTGGCAAAAAATCGGTTGCAGAAAGCAAGTTCCTTGCACTCGAAAACCCGGCTGATTT AGCCATTGAAGCCATACGCAGTCTGCGCACCAGCCTTTACTTTGCCATGCTGCAAGCCAGAAACAACGTGTTAATGATCT CCAGCGCAACGCCAAATGCAGGTAAGACCTTTATTGCCAGCAACTTAGCCGCAGTCGTCGCACAGTCCGGCATGCGGGTA TTATTTATTGATGCCGATATGCGCAAAGGTTATGCCCATAAGCTGTTTAATTATCGCGGGGATAAAGGACTATCCGACAT TATCTCTGGTCAGGTGAGCGCGGCCGACGTAGACAAGAAAATTGCGGGTGCAGGCTTCGACTTTATTTCTCGCGGCAGTG TTCCGCCGAATCCAGCAGAATTACTCTCACATAAGAGACTTGAGACATTACTGACCTGGGCATCGAATAATTATGATCTG GTCGTGGTAGATACCGCACCCATTCTGGCAGTGACTGATGCCGCAATCATTGGACGTTATGCCGGTACATCCATGTTAGT GGCGCGATTTGAAGTCAACACGATTAAAGAAATGCAAGTCAGTATCAAACGTTTCGAACACGTAGGCGTAGAAATCAAAG GATGCATTTTTAATAGCGTGCTCAACAAGGCAAGTAATTATTATGTCTATGGATACAGCCAATATAATTATGTCTATGCA GATGAAAAAAATGGATGGCAGAAATGA Protein sequence : MTTTIKHKIVTAKSEEIDLGRIYGGLLDHRKLIIGVTSVVTLLAIIYALFITPVYQANAMIQIEQKQGNALLNDISQILP DTQPVAAPEIALLQSRMILGKTVSDLNLQAVISQKYFPLFGQGWARLTGEVPGKLSINQLYLPRTDDKSPRITLTVVDQD RFLVDHDNVQFYGKVGSPITRDGMLLNVDSMHAQPGTQFIVKYISRQAAIASLLDSFDVEDQGKKTGLLLLTLSNEDKAS AATILNVISENYLEQNVARQRAEDTNSLDFLHQQLPQVRRDLDAAEDKMNLYRRQKDSVDLSLETKAVLDQVVNIDTQLN ELTFREAEIAQLYTQDHPTYKTLLEKRQTLLQARDNLNKRIAALPATQQEVERLSLDVDAGRAIYMQLLNRQQELGIAKS SIIGNVHIIDTAVTQPSPILPNRPQMVATGLVAGLMLSLILVAGKMLLRRTIESAEQLENMGVSVYASVPVSEWLNKQNV STNTKRFGGKKSVAESKFLALENPADLAIEAIRSLRTSLYFAMLQARNNVLMISSATPNAGKTFIASNLAAVVAQSGMRV LFIDADMRKGYAHKLFNYRGDKGLSDIISGQVSAADVDKKIAGAGFDFISRGSVPPNPAELLSHKRLETLLTWASNNYDL VVVDTAPILAVTDAAIIGRYAGTSMLVARFEVNTIKEMQVSIKRFEHVGVEIKGCIFNSVLNKASNYYVYGYSQYNYVYA DEKNGWQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf41 | AAO18066.1 | Orf41 | Not tested | TTSS locus | Protein | 3e-141 | 42 |
