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Name : Pat9b_3465 (Pat9b_3465) Accession : YP_004117311.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Virulence Product : type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3517 EC number : - Position : 3802189 - 3803730 bp Length : 1542 bp Strand : - Note : KEGG: spe:Spro_1784 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 DNA sequence : ATGTCTGCAAAGAATGAAACTGCTACTGGCGGTCAGGCGACTGTGCTTGAAAGACCTGAATCGGCCCGTGTTTACGCCTC CCTGTTTGAAAAAATTAACCTCAATCCGGTAGCGCATCTGAGTGATGTGGCGGTCTGGCAGGACAGTCAGGCCATGTCTG ATGCCAGCGCTGATGAACGCGTTACGGCAGCGATGCAGGTGCTACTGGAGTGCCTGAAACAGAGCGGCTTAAAAGTGGAG AAACTCGACAAAACGCTGTTGGATCATCATATTGCACAGTTGGACCAACAAATTAGCCGTCAACTCGATTTGGTGATGCA TCACCCTATTTTTCAGCAAGTTGAGTCCACCTGGCGTGGTCTGAAATCGCTGGTTGATAAGGCCGATTTTCGCCAAAACG TCAAAATTGCCTTGCTGGATCTCTCCAAAGAAGCCTTACGTCAGGATTTTGAAGATTCTCCGGAGATTATTCAGAGCGGC CTCTATCTCCAGACTTATGTCAGCGAGTATGACACCCCGGGCGGCGAACCCATTGCTGCCATCATCTCTGCCTGGGAGTT TGATGCTTCGGCACAGGATGTGGCCTTGTTGCGTAATATTGCGAAGGTCGCTTCATCGGCGCACATGCCGTTTATCGGGT CTGTCGGCCCGGCCTTCTTCCTGAAAGAGAACATGGAAGAGGTGGCTGCCATCAAGGATATTGGCAACTACTTCGACCGG GCCGAGTACATCAAGTGGCAAGCCTTCCGCGAAAGCGATGATGCGCGTTACATCGGCCTGACCATGCCCCGTGTGCTGGG ACGCCTGCCGTATGGCCCGGATACCCTGCCGGTGCGGAGCTTCAACTACATGGAGGAGGTGAAAGGCCCGGATCACGACA AGTACCTGTGGATCAGTGCCTCTTTTGCCTTTGCCACCAATATGGTACGCAGTTTTATCCACAACGGCTGGTGCGTACAA ATCCGTGGTCCCCAAGCTGGCGGTGCGGTGCAGGATCTGCCAATCCATCTCTATGATCTTGGCACCGGCAATCAGGTAAA AATTCCTTCTGAAGTGATGATCCCGGAAACCCGCGAATTCGAGTTTGCCAGTCTTGGCTTTATCCCGCTGAGTTACTACA AAAATCGCGATTATGCCTGCTTTTTCTCGGCGAATTCGACGCAAAAGCCCCTTCAGTTTGACACTGCTGATGCCACGGCT AACAGCCGTATCAACGCTCGTCTGCCTTATATATTTTTGCTATCGCGTATTGCGCACTACCTGAAGATGATTCAGCGCGA AAATATCGGCACCACCAAGGATCGGCGTTTGCTGGAGATGGAGTTGAACGCCTGGGTACGCAGCCTGGTCACCGAGATGA CCGATCCCGGCGACGATCTTCAGGCCTCACATCCACTGCGGGATGCCAGGGTGGTGGTGGAGGACATTGAGGATAACCCC GGGTTTTTCCGCGTGAAGTTGTTCGCTGTGCCGCATTTCCAGGTGGAAGGTATGGATGTCAACCTGTCGCTGGTTTCACA GATGCCAAAAGCGAAATCGTAA Protein sequence : MSAKNETATGGQATVLERPESARVYASLFEKINLNPVAHLSDVAVWQDSQAMSDASADERVTAAMQVLLECLKQSGLKVE KLDKTLLDHHIAQLDQQISRQLDLVMHHPIFQQVESTWRGLKSLVDKADFRQNVKIALLDLSKEALRQDFEDSPEIIQSG LYLQTYVSEYDTPGGEPIAAIISAWEFDASAQDVALLRNIAKVASSAHMPFIGSVGPAFFLKENMEEVAAIKDIGNYFDR AEYIKWQAFRESDDARYIGLTMPRVLGRLPYGPDTLPVRSFNYMEEVKGPDHDKYLWISASFAFATNMVRSFIHNGWCVQ IRGPQAGGAVQDLPIHLYDLGTGNQVKIPSEVMIPETREFEFASLGFIPLSYYKNRDYACFFSANSTQKPLQFDTADATA NSRINARLPYIFLLSRIAHYLKMIQRENIGTTKDRRLLEMELNAWVRSLVTEMTDPGDDLQASHPLRDARVVVEDIEDNP GFFRVKLFAVPHFQVEGMDVNLSLVSQMPKAKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-96 | 43 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 1e-96 | 43 |
| HH0247 | NP_859778.1 | hypothetical protein | Not tested | HHGI1 | Protein | 3e-93 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_3465 | YP_004117311.1 | type VI secretion protein | VFG2475 | Protein | 3e-108 | 48 |
| Pat9b_3465 | YP_004117311.1 | type VI secretion protein | VFG2093 | Protein | 5e-104 | 43 |
| Pat9b_3465 | YP_004117311.1 | type VI secretion protein | VFG2070 | Protein | 4e-86 | 42 |
