Gene Information

Name : Pat9b_3451 (Pat9b_3451)
Accession : YP_004117297.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3782586 - 3783617 bp
Length : 1032 bp
Strand : +
Note : PFAM: integrase family protein; KEGG: seh:SeHA_C3507 phage integrase family protein

DNA sequence :
ATGGCTGTTAGTAAATTACCCTCCGGCAAATGGCAGGCACAGGTTTTCCCCAGCGGACGTGACGGAAAGCGTATCCGTCG
TCAGTTCGCGACAAAAGGGGAAGCTCTGTCGTATGAGAAATACGTAAAAGAACAGGCTCAGGATAAGCCTTGGCTGGGTG
AAAAAGCGGATAAACGGCGGGTAATTGAGCTGGTTGAATTGTGGTTCAACACGCATGGCATTACGTTAGCGGATGGTGAG
AAGCGGAGAACCACAATGGCGTTCGCCTGCGAGGCGATGGGAAACCCACTCGCAACCGAGTTTAACGCGAAAATTTTTGC
GTCTTATCGGGAGCAGCGGTTAAGCGGGAAGATAACCCGCTCCACCCGAGTGAAGACGGTAACGCCTCGCACGGTCAATT
TGGAGCTGGCGTACTTTCGGGCGATGTTTAACGAGTTACGCCGATTGGATGAATGGACCGCACCGAACCCGTTAGAAAAC
GTGCGCGAGTTTAAAATCAGTGAATCGGAGATGGCTTATCTTACCATTGAGGAAATAAGAGCCCTCCTCGCTGAATGTGA
GAATAGCCGTTCTAAAGATCTGACTACCATTGTGAAAATCTGCCTGGCAACTGGCGCACGATGGAGTGAGGCTGAAGGCT
TAAAGGGGAACCAAATTCGCGCCGGTCAGATCATCTACGTGAAAACTAAAGGCAAGAAAAACCGAGCGGTGCCGATAACT
GAAAAATTACAGGCTGAACTGCCATCGAGCAGGAAAGCGCAACAGCTTTTTGCGACGTGCTATTCAGCTTTTAGAAAAGC
TATGCAGAGGGCGGGTATCGAGACTCCTGCGGGCCAGTTGACGCATGTTTTGCGCCACACATTCGCCTCACACTTCATGA
TGAATGGTGGAAATATTCTTGTGCTTCAACGGATATTGGGCCATACAGATATCAAGGTAACAATGCGCTATGCACATTTT
GCACCTGATCATTTGGATGATGCAAAAAAACTGAACCCTTTAACTCAATTTTTAGTGATGGAAACGAAATAA

Protein sequence :
MAVSKLPSGKWQAQVFPSGRDGKRIRRQFATKGEALSYEKYVKEQAQDKPWLGEKADKRRVIELVELWFNTHGITLADGE
KRRTTMAFACEAMGNPLATEFNAKIFASYREQRLSGKITRSTRVKTVTPRTVNLELAYFRAMFNELRRLDEWTAPNPLEN
VREFKISESEMAYLTIEEIRALLAECENSRSKDLTTIVKICLATGARWSEAEGLKGNQIRAGQIIYVKTKGKKNRAVPIT
EKLQAELPSSRKAQQLFATCYSAFRKAMQRAGIETPAGQLTHVLRHTFASHFMMNGGNILVLQRILGHTDIKVTMRYAHF
APDHLDDAKKLNPLTQFLVMETK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4645 NP_458725.1 phage integrase Not tested SPI-7 Protein 9e-91 54
t4338 NP_807932.1 phage integrase Not tested SPI-7 Protein 9e-91 54