Gene Information

Name : Pat9b_3427 (Pat9b_3427)
Accession : YP_004117276.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : glycoside hydrolase family protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3772
EC number : -
Position : 3766951 - 3767466 bp
Length : 516 bp
Strand : -
Note : PFAM: glycoside hydrolase family 24; KEGG: eta:ETA_05770 putative phage lysozyme

DNA sequence :
ATGAATCTGCAAACCGTTAAGCGATGTGTTGTTGGCGCGGTGCTGGCCATCGCCGCCACGCTGCCGGGATTTCAGCAACT
GCACACCTCAGTGGAGGGGCTGAAACTCATTGCAGACGCCGAAGGCTGCCGCCTGAAGCCTTACCAGTGCGACGCGGGCA
AATGGACCGACGGGATCGGCAACACGTCCGGCGTGGTGCCGGGCAGGAGCATTACCGAACGGCAGGCGGCGGGGAACTTC
ATCACCAACGTGTTACGCGTTGAGGCGGCACTGGCGCGCTGCGTGGCGGTCACTATGCCGCAGCAGGTTTATGACGCGCT
GGTGTCGCTGGCGTTCAACGTCGGCACCGGCAACGTGTGCGGCTCCACGATGGTGGCACTGCTGAAAAAGGGGCGATGGC
GGGATGCGTGTCTGCAACTGCCCCGCTGGGTGTATGTGCTGGGCGTATTTAATCAGGGGCTGGATAACCGGCGTCAGCGT
GAACAGGCCTGGTGCCTGAAAGGAGTCCGGGGATGA

Protein sequence :
MNLQTVKRCVVGAVLAIAATLPGFQQLHTSVEGLKLIADAEGCRLKPYQCDAGKWTDGIGNTSGVVPGRSITERQAAGNF
ITNVLRVEAALARCVAVTMPQQVYDALVSLAFNVGTGNVCGSTMVALLKKGRWRDACLQLPRWVYVLGVFNQGLDNRRQR
EQAWCLKGVRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nucD2 NP_458702.1 putative lysozyme Not tested SPI-7 Protein 2e-54 80
nucD NP_807909.1 lysozyme Not tested SPI-7 Protein 2e-54 80