Gene Information

Name : Pat9b_3415 (Pat9b_3415)
Accession : YP_004117265.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : tail sheath protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3497
EC number : -
Position : 3759237 - 3760406 bp
Length : 1170 bp
Strand : -
Note : PFAM: tail sheath protein; KEGG: sbc:SbBS512_E2493 major tail sheath protein

DNA sequence :
ATGGCTCAGGATTACCACCACGGCGTGCGCGTTGAAGAAATCAACGAAGGCAGCCGAATCATTACCACCGTCAGCACGGC
GATTGTGGGACTGGTCTGCACCGGCGATGACGCCGACGCGGCCACGTTCCCCCTTAACCGCCCGGTGCTGTTAACTGATG
TGCTCACCGCCAGCGGCAAGGCCGGGGAATCCGGCACGCTGGCCCGCTCGCTGGATGCGATCGGTGACCAGTCCAAACCC
GTCACCGTTGTGGTGCGTGTTCCCCAGGGGGAAACCGAAGCGGAAACCACGTCCAACATCATCGGCGGCGTGGTCAACGG
ACAGCGCACCGGCATGAAAGCGCTGCTGGCCGCACAGTCTGTCTGTGGCGTAAAGCCGCGCATTCTCGGCGTGCCGGGAC
ATGATACGCAGGCCGTTGCGACTGAACTGCTGAGCGTGGCGCAGAGCCTGCGCGCGTTTTCCTACCTGTCGGCCTACGGC
TGCGAAACCGTGGAAGAAGCCATTGCCTACCGTGCCAACTTCAGCCAGCGCGAAGGGATGCTTATCTGGCCGGACTTTAT
CAGCTTTGGCACCGTACTGAACGCAGACGCGGCGGCCTATGCCACCGCCCGCGCACTCGGGCTGCGCGCCAAAATCGACG
AACAGACAGGCTGGCATAAGTCGCTCTCAAACGTCGGCGTGAACGGTGTTACCGGCATTTCAAAGGATGTGTTCTGGGAT
TTGCAGGACCCGGCGACGGATGCGGGCCTGCTGAACCAGAACGACATCACCACGCTGATCCGCAAGGACGGCTACCGCTT
CTGGGGTTCCCGCTGCCTGAGTGATGATCCGCTGTTTGCGTTTGAGAACTACACCCGCACCGCGCAGGTGCTGATGGACA
CGATGGCCGAAGCGCAGATGTGGGCGGTGGATGGCCCGTTGAACCCGTCACTGGCGCGCGACATCATCGAGAGTATCCGC
GCGAAGCTGCGCAGCCTGGTCAGTCAGGGCTATCTCATCGGCGCGGACTGCTGGCTGGATGAAAGCGTGAACGACAAGGA
CACGCTGAAGGCCGGGAAGCTGCTGATCGATTACGACTACACCCCGGTGCCGCCGCTGGAAAACCTGCTGCTGCGTCAGC
GTATCACCGACCAGTACCTGGTGGATTTCGCCAGCCGCGTCAGCGCATAA

Protein sequence :
MAQDYHHGVRVEEINEGSRIITTVSTAIVGLVCTGDDADAATFPLNRPVLLTDVLTASGKAGESGTLARSLDAIGDQSKP
VTVVVRVPQGETEAETTSNIIGGVVNGQRTGMKALLAAQSVCGVKPRILGVPGHDTQAVATELLSVAQSLRAFSYLSAYG
CETVEEAIAYRANFSQREGMLIWPDFISFGTVLNADAAAYATARALGLRAKIDEQTGWHKSLSNVGVNGVTGISKDVFWD
LQDPATDAGLLNQNDITTLIRKDGYRFWGSRCLSDDPLFAFENYTRTAQVLMDTMAEAQMWAVDGPLNPSLARDIIESIR
AKLRSLVSQGYLIGADCWLDESVNDKDTLKAGKLLIDYDYTPVPPLENLLLRQRITDQYLVDFASRVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4301 NP_807898.1 major tail sheath protein Not tested SPI-7 Protein 3e-154 88
STY4607 NP_458690.1 probable major tail sheath protein Not tested SPI-7 Protein 3e-154 88
unnamed ABR13484.1 putative tail sheath protein Not tested PAGI-6 Protein 1e-113 66