Gene Information

Name : Pat9b_0326 (Pat9b_0326)
Accession : YP_004114208.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Resistance
Product : cation/acetate symporter ActP
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 385719 - 387371 bp
Length : 1653 bp
Strand : -
Note : KEGG: esa:ESA_00120 hypothetical protein; TIGRFAM: cation/acetate symporter ActP; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter

DNA sequence :
ATGAAGCGTCTGCTCCCGCTGTTCCTCGCTACCGCACCGCTCAGCGCCGTCGCGGCGGATGCCATTACCGGTGCGGTGCA
AAAGCAACCGACCAACTACGAAGCCATTATTATGTTTGTGGTGTTCGTTGCCGCAACCCTGGGGATTACCTGGTGGGCGT
CCAAACGTACCCGTTCGCGCAGCGATTATTACACCGCCGGTGGCAATATCACTGGCTTTCAAAACGGGCTGGCGATGGCG
GGCGATTATATGTCGGCGGCCTCGTTTCTCGGGATCTCCGCCCTGGTCTACACCTCGGGTTATGACGGACTGATCTATTC
GCTCGGCTTTCTGGTGGGCTGGCCGATGATCCTGTTTCTGATTGCCGAGCGTTTACGCAACCTTGGTCGCTATACCTTTG
CCGACGTGGCCTCCTATCGTCTGGAACAAAAACCGATTCGCACCCTCTCCGCCTGTGGTTCGTTGGTGGTGGTGGCGCTG
TATCTGATTGCGCAGATGGTGGGTGCCGGTAAGCTGATTCAGTTGCTATTCGGCCTCAATTACCACATCGCAGTGGTGCT
GGTAGGCATCCTGATGGTGATGTATGTCTTGTTCGGCGGCATGCTGGCCACTACCTGGGTGCAAATCATCAAAGCGGTGT
TGCTGCTGTTTGGTGCGACCTTTATGGCCATCATGGTGATGAAAGCGGCGGGCTTTAGTTTCAATACCTTGTTTACCGAA
GCGATGGCGGTACACCCGAAAGGCGCGGCAATTATGCAGCCGGGCGGGCTGGTGAAAGACCCGATCTCCGCCCTGTCGCT
CGGACTCGCCCTGATGTTCGGTACGGCCGGGTTACCGCATATCCTGATGCGCTTCTTCACGGTAGCCGATGCCCGTGAGG
CGCGTAAAAGCGTGTTCTGGGCCACTGGCTTTATGGGCTATTTCTACTTCCTCACCTTTATTATCGGCTTCGGGGCAATT
CTGCTGGTGGGGGCCAACCCGGCGTTTAAAGATGCCAGCGGCGCGTTGATCGGCGGCACCAATATGGCGGCGGTGCATCT
GGCAGACGCGGTAGGTGGCAGCCTGTTCCTCGGCTTCATCTCTGCTGTGGCGTTCGCCACCATTTTGGCGGTGGTCGCCG
GGTTAACGCTGGCAGGCGCATCCGCGGTTTCCCATGACCTGTATGCCAGCGTGATCCGCAAAGGCCATGCCACTGAGCGC
GAGGAGTTGCGCGTCTCCAAAATTACCGTGCTGGTGCTGGGGGTGGTCGCCATTGCGCTGGGGATTTTGTTCGAGAAGCA
AAACATCGCCTTTATGGTTGGCCTCGCGTTCTCCATCGCTGCCAGCTGTAACTTCCCGATTATTTTGCTGTCGATGTATT
GGTCAAAACTGACCACGCGCGGGGCGATGATTGGCGGCTGGCTGGGCTTGCTGACGGCAGTGGTGTTGATGATCCTTGGG
CCGACCATTTGGGTGCAGGTGCTGGGACATGCTGCACCAATCTATCCGTATGAGTATCCGGCGCTATTCTCCATGTTAGC
GGCGTTTATCGGCACCTGGCTGTTTTCCATTACCGATCAGTCGGAACAGGGGGCTATTGAGCGTCGGCGCTTCCGTGGGC
AGTTTATTCGCTCGCAAACGGGCGTGGGGATTGAGCAGGGGAAAGCGCACTGA

Protein sequence :
MKRLLPLFLATAPLSAVAADAITGAVQKQPTNYEAIIMFVVFVAATLGITWWASKRTRSRSDYYTAGGNITGFQNGLAMA
GDYMSAASFLGISALVYTSGYDGLIYSLGFLVGWPMILFLIAERLRNLGRYTFADVASYRLEQKPIRTLSACGSLVVVAL
YLIAQMVGAGKLIQLLFGLNYHIAVVLVGILMVMYVLFGGMLATTWVQIIKAVLLLFGATFMAIMVMKAAGFSFNTLFTE
AMAVHPKGAAIMQPGGLVKDPISALSLGLALMFGTAGLPHILMRFFTVADAREARKSVFWATGFMGYFYFLTFIIGFGAI
LLVGANPAFKDASGALIGGTNMAAVHLADAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIRKGHATER
EELRVSKITVLVLGVVAIALGILFEKQNIAFMVGLAFSIAASCNFPIILLSMYWSKLTTRGAMIGGWLGLLTAVVLMILG
PTIWVQVLGHAAPIYPYEYPALFSMLAAFIGTWLFSITDQSEQGAIERRRFRGQFIRSQTGVGIEQGKAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 9e-134 58
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 2e-77 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_0326 YP_004114208.1 cation/acetate symporter ActP BAC0564 Protein 0.0 85
Pat9b_0326 YP_004114208.1 cation/acetate symporter ActP BAC0570 Protein 3e-144 65