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Name : Pat9b_3266 (Pat9b_3266) Accession : YP_004117118.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Virulence Product : ABC-3 protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 3602707 - 3603579 bp Length : 873 bp Strand : + Note : PFAM: ABC-3 protein; KEGG: elf:LF82_p185 SitC protein DNA sequence : ATGCAATGGCTACTGGAACCCTTCAGCTACCAATATATGCTGAACGCCATGTGGGTGTCGGCGCTGGTCGGCGGCTTGTG CGCCTTTCTCTCCTGCTATTTGATGCTGAAAGGCTGGTCGCTGATTGGTGATGCGCTGTCGCATTCCATCGTGCCCGGCG TCGCCGGTGCCTATATGCTCGGTTTACCCTTTGCTCTCGGTGCCTTTCTCTCGGGAGGGTTGGCGGCAGGCAGTATGTTG TTCCTCAACCAACGAACCCGCCTGAAAGAAGACGCCATTATCGGCCTGATTTTTTCCTCGTTCTTCGGCCTCGGGCTATT TATGGTGTCGCTTAACCCAACCGCGGTGAATATCCAAACCATTGTATTAGGCAACATTCTCGCCATCGCCCCCGCCGATA TCCTGCAACTGACGTTGATTGGCGCAGTCTCCATTAGTGTGTTGTTTTTCAAATGGAAAGATCTGCTGGTGACCTTTTTT GATGAGAACCATGCGCGCGCCATCGGGCTGCATCCGCAGCGGCTGAAACTGTTGTTTTTCACCCTGCTGGCACTCTCTAC CGTCGCAGCGCTGCAAACTGTCGGTGCATTTCTGGTGATTTGCCTGGTGGTCACGCCGGGAGCGACTGCGTGGCTGCTGA CCGATCGTTTCCCGCGTCTGCTGGCTATCGCCGTTACCATCGGTAGCGTCACCAGCTTTCTGGGTGCCTGGGCCAGCTAT TACCTTGACGGCGCCACGGGCGGTATCATCGTAGTGGCGCAAACGCTGTTGTTTTTACTGGCGTTTATCTTCGCCCCGCA ACAGGGTCTGCTGGCGCAACGCCGACGCGCACGCAGCCATCAGGAGGATGTCGATGCTGACGTTGCTGCTTGA Protein sequence : MQWLLEPFSYQYMLNAMWVSALVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFALGAFLSGGLAAGSML FLNQRTRLKEDAIIGLIFSSFFGLGLFMVSLNPTAVNIQTIVLGNILAIAPADILQLTLIGAVSISVLFFKWKDLLVTFF DENHARAIGLHPQRLKLLFFTLLALSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLAIAVTIGSVTSFLGAWASY YLDGATGGIIVVAQTLLFLLAFIFAPQQGLLAQRRRARSHQEDVDADVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-72 | 87 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-72 | 87 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 2e-72 | 87 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-72 | 87 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 3e-72 | 87 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 2e-30 | 42 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 4e-30 | 42 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 4e-30 | 42 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 4e-30 | 42 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 2e-30 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_3266 | YP_004117118.1 | ABC-3 protein | BAC0351 | Protein | 1e-72 | 87 |
| Pat9b_3266 | YP_004117118.1 | ABC-3 protein | BAC0441 | Protein | 2e-52 | 67 |
| Pat9b_3266 | YP_004117118.1 | ABC-3 protein | BAC0352 | Protein | 9e-31 | 42 |
| Pat9b_3266 | YP_004117118.1 | ABC-3 protein | BAC0442 | Protein | 8e-26 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_3266 | YP_004117118.1 | ABC-3 protein | VFG0527 | Protein | 1e-72 | 87 |
| Pat9b_3266 | YP_004117118.1 | ABC-3 protein | VFG0528 | Protein | 9e-31 | 42 |
