Gene Information

Name : Pat9b_3265 (Pat9b_3265)
Accession : YP_004117117.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 3601883 - 3602704 bp
Length : 822 bp
Strand : +
Note : KEGG: ent:Ent638_1112 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGACACAGGTGCCAGCGATTACCGCTGCTGCGGTCAGCGTCACTTACCGTAACGGGCATACCGCGCTACGTGAAGCCAA
TTTCAGCGTGCCTGGCGGCTCGATCGCCGCGCTGGTCGGGGTTAACGGTTCCGGTAAATCGACGTTGTTTAAGGCGGTGA
TGGGCTTTGTGCGTCTGGCACAGGGGGAGATCCGCATTCTCGGCATGCCCACGCGCCAGGCGTTGCGGCGCAATCTGGTC
GCTTACGTGCCACAAGCCGAAGAAGTTGACTGGTCCTTTCCAGTGCTGGTTGAAGACGTGGTAATGATGGGACGGTATGG
CCATATGGGGACGCTGCGCATCGCCAAAGCGCGCGATCACGCTATCGTCAATGCCGCCCTGGAACGGGTTGATATGCTGG
CCTTCCGTCAGCGCCAGATTGGCGAGCTATCCGGTGGTCAGAAAAAACGCGTGTTTTTGGCACGAGCCATTGCGCAGCAA
GGAGAAGTCATCCTGCTGGATGAGCCTTTCACCGGGGTCGATGTGCAGACCGAGGCGAAGATCATCAGCCTGCTGGGTGA
GCTGCGTGACGAGGGCAAAACCATGCTGGTATCAACCCATAACCTCGGTTCCGTCACTGAGTTTTGTGATTACACCGTAA
TGGTGAAAGGCACGGTGCTGGCAAGCGGCCCCACCGCCACCACCTTTACGGCGGAAAATCTTGAGCGCGCCTTCAGCGGA
GTGCTGCGCCATGTGGTGCTGAACGGTTCAGAAGACCGTATTATCACCGATGATGAGCGCCCGTTTGTGTCACCTCTGCC
ACCGGGCAGCGAGAGGGTCTGA

Protein sequence : 
MTQVPAITAAAVSVTYRNGHTALREANFSVPGGSIAALVGVNGSGKSTLFKAVMGFVRLAQGEIRILGMPTRQALRRNLV
AYVPQAEEVDWSFPVLVEDVVMMGRYGHMGTLRIAKARDHAIVNAALERVDMLAFRQRQIGELSGGQKKRVFLARAIAQQ
GEVILLDEPFTGVDVQTEAKIISLLGELRDEGKTMLVSTHNLGSVTEFCDYTVMVKGTVLASGPTATTFTAENLERAFSG
VLRHVVLNGSEDRIITDDERPFVSPLPPGSERV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-102 80
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-102 80
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 1e-102 80
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 8e-102 80
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 8e-102 80

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_3265 YP_004117117.1 ABC transporter-like protein BAC0350 Protein 7e-103 80
Pat9b_3265 YP_004117117.1 ABC transporter-like protein BAC0440 Protein 1e-78 63
Pat9b_3265 YP_004117117.1 ABC transporter-like protein BAC0400 Protein 2e-48 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_3265 YP_004117117.1 ABC transporter-like protein VFG0526 Protein 6e-103 80