Gene Information

Name : Pat9b_3232 (Pat9b_3232)
Accession : YP_004117084.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Virulence
Product : putative sugar-specific permease SgaT/UlaA
Function : -
COG functional category : S : Function unknown
COG ID : COG3037
EC number : -
Position : 3568647 - 3570023 bp
Length : 1377 bp
Strand : +
Note : PFAM: putative sugar-specific permease SgaT/UlaA; KEGG: pwa:Pecwa_0780 putative sugar-specific permease SgaT/UlaA

DNA sequence :
ATGTTTATCCAAAACCTTTTATTGGTAGTTGTCGACGTGCTGAAAGTGCCTTCAATCCTGGTAGGATTAGTGGCTTTATT
TGGTCTGGTCGCGCAAAGAAAACCGTTCCCGGATGTCATTAAAGGTACGGTAAAAACGATTCTGGGTTTTTTAGTGCTGG
CAGGTGGTGCCTCTGTATTGGTCGGTTCACTGACTCCACTCGGTGATATCTTCAAGCAGGCATTTGATGTTCAAGGCATT
ATTCCTAACAACGAAGCGATGGTTTCCATTGCGCTGGAAAAATACGGTGCGCCCACCACGCTGATCATGGCGTTTGGTAT
GGTGGCGAATATTATCGTTGCTCGCTTTACCCGCCTGAAATATATCTACCTTTCTGGTCATGTGACATTTTATATGGCCT
GTATGGTGGCCATTATTCTGTCGGTTGCCGGTTTCGAAGGCGTCCAGCTTATTTATACCGGCTCGCTGGCACTCGGCATG
TTGATGGCATTTTTCCCGGCGCTGGCGCAACCGCATATGCGTAAAATTGTTGGACATGACCAGGTCGCATTAGCCCATAC
CGGGACCGTTGGTTATGTGCTGTCAGGCTGGATTGGTTCATTAGTCGGTAAAGGTTCGAAATCTACCGAAGAGATGAACA
TGCCAAAAAACCTGAGTTTTTTGCGTGACAGTACCATCTCTATTTCACTGACCATGATGATTATCTACTTTATTTTGTCT
GCTTCGGCGGGCAAAGAATATGTGGAAACACATTTCAGTCATGGTCAGAACTATCTGGTCTATTCATTCGTACAGGCCAT
CACCTTCGCAGCTGGCGTATTTATTATTCTGCAAGGTGTACGTTTAATTCTGGCAGAGATCGTACCGGCGTTCACCGGCT
TCTCTGAAAAGCTGGTACCGAATGCCCGTCCGGCACTCGACTGTCCGATTGTATTCCCTTATGCGCCGAATGCGGTACTG
GTTGGCTTTATTTCCAGCTTCGTCGGTGGCCTGGTCGGATTATTTATTCTCGGCCAATTGAAATGGGTATTAATTTTACC
AGGTGTCGTGCCACACTTCTTCTGCGGCGCTACTGCTGGGGTATTTGGCAATGCGACCGGCGGTAAACGTGGTGCAATGC
TCGGTGCATTCGCCCATGGTGTGTTAATTACCTTCCTGCCAGTAGCGCTGTTGCCGGTATTGGGCGCTCTGGGATTAACT
AACACCACCTTCTCAGATACCGACTTTGGTGTCACCGGGATCATCCTGGGTAATATGGCCCGATATATGGACAAGGGCAC
CATTACCATGGTGATTACCGGGATTTTCGCTCTGCTGGTTATTTATAACTTTGCCACCAGTAATAAAGGCGTGGCAAAAG
AAGTGAAAGGCGAATAA

Protein sequence :
MFIQNLLLVVVDVLKVPSILVGLVALFGLVAQRKPFPDVIKGTVKTILGFLVLAGGASVLVGSLTPLGDIFKQAFDVQGI
IPNNEAMVSIALEKYGAPTTLIMAFGMVANIIVARFTRLKYIYLSGHVTFYMACMVAIILSVAGFEGVQLIYTGSLALGM
LMAFFPALAQPHMRKIVGHDQVALAHTGTVGYVLSGWIGSLVGKGSKSTEEMNMPKNLSFLRDSTISISLTMMIIYFILS
ASAGKEYVETHFSHGQNYLVYSFVQAITFAAGVFIILQGVRLILAEIVPAFTGFSEKLVPNARPALDCPIVFPYAPNAVL
VGFISSFVGGLVGLFILGQLKWVLILPGVVPHFFCGATAGVFGNATGGKRGAMLGAFAHGVLITFLPVALLPVLGALGLT
NTTFSDTDFGVTGIILGNMARYMDKGTITMVITGIFALLVIYNFATSNKGVAKEVKGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 7e-92 60
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 7e-92 60
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 8e-92 59