Gene Information

Name : Pat9b_3230 (Pat9b_3230)
Accession : YP_004117082.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Virulence
Product : putative PTS IIA-like nitrogen-regulatory protein PtsN
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1762
EC number : -
Position : 3567791 - 3568252 bp
Length : 462 bp
Strand : +
Note : PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: pwa:Pecwa_0778 putative PTS IIA-like nitrogen-regulatory protein PtsN

DNA sequence :
ATGTCGAATCTGTCAAAGTGGCTGAATGAAGAAAAAATCCAGTATCTGACAAGCGTCTCCGACTGGAAAGAAGCAATTCA
GGTTGCCGGACGCCCGTTACTGAATGAAGGCGCGATTTCTCAACAGTATATTGATGTCATCATTCAGCAAAAACAGGATA
TTGGCCCCTATTTTGTTATCGCGCCACGCATCGCCATGCCCCATGCGCGCCCAGAGCAGGGAGCGCACAAACTCGGGTTA
TCGATTGTCAAACTGGGCCAGGCCGTCAAATTTGATGCTGATGAAAATGATCCGGTTGATGCTATTTTTATGTTCTCAGC
ACCGGACAGCAACAGCCATATTGAAATGATTTCTCAACTGGCTGAAGTCCTCTCCGATGACGAGACGATGGGGCGATTAT
TCAACTCACGTAGTAAAGAAGAATTGAGCGCCATTTTACTGGCAGACAAGGCAGTTAATTAA

Protein sequence :
MSNLSKWLNEEKIQYLTSVSDWKEAIQVAGRPLLNEGAISQQYIDVIIQQKQDIGPYFVIAPRIAMPHARPEQGAHKLGL
SIVKLGQAVKFDADENDPVDAIFMFSAPDSNSHIEMISQLAEVLSDDETMGRLFNSRSKEELSAILLADKAVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF10 AAK27337.1 unknown Not tested PAI-I AL862 Protein 4e-28 43
vpeA ADD91727.1 putative PTS system-specific IIA component VpeA Virulence PAI-I AL862 Protein 4e-28 43