|
Name : Pat9b_3176 (Pat9b_3176) Accession : YP_004117028.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Unknown Product : tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 3494277 - 3495170 bp Length : 894 bp Strand : - Note : KEGG: yen:YE3380 site-specific tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein DNA sequence : GTGACAGACAGCGACCTGATCGAACAGTTTCTGGATACGCTCTGGATTGAGCGCAATCTGGCACAAAATACCCTCGCATC GTATCGTCAGGATTTGCAAACCCTTACCGGCTGGCTGCATCACCATGAGCGCACGCTACTGACGCTGGAAGCGCTCGATT TGCAGCAGTTTCTGGCGGAGCGGGTGGAAGGGGGGTACAAAGCCACCAGTTCTGCACGCACCCTGAGCGCCATCCGGCGG TTGTTTCAGTATCTGTATCGCGAAAAGCTGCGCAGCGACGATCCCAGCGCACTGCTTTCCGCCCCGAAACTGCCGCAGCG CTTGCCGAAGGATTTGAGTGAAAGCCAGGTGGAACGCCTGTTGCAGGCCCCCTCAACTGAAATTCCACTCGAACTGCGCG ACAAAGCCATGCTGGAATTACTTTACGCTACCGGCCTGCGCGTTTCTGAGCTGGTGGGGTTGACGCTCAGCGATGTCAGT CTGCGTCAGGGGGTGGTGCGGGTGATTGGTAAAGGCAACAAAGAACGCCTTGTGCCAATGGGTGAAGAAGCGATCTACTG GATTGAGCATTATATGACGCATGGTCGTCCGTGGTTACTCAACGGCCAGACGCTGGATGTGCTCTTTCCCAGCAATCGCG CGCAAAAGATGACCCGTCAGACCTTTTGGCACCGCATTAAGCACTACGCTTTGTTGGCGGGAATCGACAGCGAAAAACTG TCGCCGCATGTGTTGCGCCACGCTTTTGCGACACATCTATTGAACCACGGGGCCGATTTGCGCGTCGTACAGATGTTGTT AGGTCACAGTGACCTTTCCACTACCCAAATTTATACGCACGTTGCCACTGAGCGCTTGCGATTGTTACATCAACAGCATC ATCCGCGCGCCTGA Protein sequence : MTDSDLIEQFLDTLWIERNLAQNTLASYRQDLQTLTGWLHHHERTLLTLEALDLQQFLAERVEGGYKATSSARTLSAIRR LFQYLYREKLRSDDPSALLSAPKLPQRLPKDLSESQVERLLQAPSTEIPLELRDKAMLELLYATGLRVSELVGLTLSDVS LRQGVVRVIGKGNKERLVPMGEEAIYWIEHYMTHGRPWLLNGQTLDVLFPSNRAQKMTRQTFWHRIKHYALLAGIDSEKL SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 4e-61 | 57 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 4e-61 | 57 |
