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Name : Pat9b_0299 (Pat9b_0299) Accession : YP_004114181.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 357434 - 358840 bp Length : 1407 bp Strand : + Note : SMART: AAA ATPase; manually curated; TIGRFAM: replicative DNA helicase; KEGG: dda:Dd703_0741 replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein DNA sequence : ATGGCAGGAAATAAACCCACCAACAAATCGAACGAAACCCGCGACCGCCAGCTGGAGGGCGTGAAAATGCCGCCGCATTC CATTGAAGCGGAGCAGTCGGTACTCGGTGGGTTGATGCTGGATAATGAGCGCTGGGACAACGTCTCCGAGCGTGTCGTGG CGGAAGATTTCTTCAACCGCTCGCACCGGCTGATCTTCTCCGAAATGCAGAACCTGCTGGAGGCCGGGCAGCCTATCGAC CTGATTACGCTGTCTGAATCGCTCGAAACGCGCGGTGAGCTGGAGATGGCGGGGGGCTTTGCCTATCTTGCCGAACTGGC GAAAAACACCCCAAGCGCCGCCAACATTGGCGCCTATGCTGACATCGTCCGTGAACGCGCCGTGGTGCGCGAAATGATCT CGGTCGCCAATCAGATTGCCGATGCCGGTTACGATCCGCAGGGGCGCAGCAGCGAAGACCTGCTCGATTTTGCGGAATCC AACGTCTTCAAGATCGCCGAACAGCGTGCCAACAAAGATGATGGCCCGAAGAACATCGAGCAAATTCTGGAAGCCACGGT ATCGCGTATTGAATCGCTGGTTTCCACGCCACACGATGGTGTGACCGGGGTGGATACCGGTTATCAGGATCTGAACAAAA AAACCGCCGGTTTGCAGGGGTCAGATCTGATTATCGTGGCGGCGCGTCCGTCGATGGGTAAAACCACCTTCGCCATGAAC CTGTGCGAAAACGCCGCCATGCTGCACGAAAAGCCGGTGCTGATTTTCAGTCTGGAAATGCCCAGCGAACAGATCATGAT GCGTATGCTGGCTTCATTATCACGTGTTGATCAGACGCGTATCCGTACCGGTCAGCTCGAAGATGAGGATTGGGCGCGTA TTTCTGCTTCTATGGGCATCCTGTTGGAAAAGAAGAACATGTTTATTGATGATTCTTCCGGCCTGACGCCGACAGAAGTG CGTTCGCGTGCACGCCGTATCTATCGTGAAAACGGGGGGTTGAGCATGATCATGATCGACTACCTGCAATTGATGCGCGT GCCTTCGTTATCCGACAACCGCACGCTGGAAATTGCGGAGATCTCGCGCTCGCTGAAAGCGTTGGCGAAAGAGTTGAACG TGCCGGTGGTGGCGCTGTCGCAGCTTAACCGCTCGCTGGAACAGCGTGCCGACAAACGCCCGGTGAACTCGGATCTGCGT GAATCTGGCTCGATCGAACAGGATGCTGACCTGATCATGTTTATTTACCGTGATGAGGTGTATCACGAAAATAGCGATCT GAAAGGGATCGCCGAGATCATCATTGGTAAACAGCGTAACGGACCGATTGGCACAGTACGTTTGACCTTCAATGGTCATT GGTCGCGTTTTGATAACTACGCAGGCCCGCAATACGACGACGAATAA Protein sequence : MAGNKPTNKSNETRDRQLEGVKMPPHSIEAEQSVLGGLMLDNERWDNVSERVVAEDFFNRSHRLIFSEMQNLLEAGQPID LITLSESLETRGELEMAGGFAYLAELAKNTPSAANIGAYADIVRERAVVREMISVANQIADAGYDPQGRSSEDLLDFAES NVFKIAEQRANKDDGPKNIEQILEATVSRIESLVSTPHDGVTGVDTGYQDLNKKTAGLQGSDLIIVAARPSMGKTTFAMN LCENAAMLHEKPVLIFSLEMPSEQIMMRMLASLSRVDQTRIRTGQLEDEDWARISASMGILLEKKNMFIDDSSGLTPTEV RSRARRIYRENGGLSMIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLR ESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGHWSRFDNYAGPQYDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 9e-100 | 54 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-105 | 53 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 3e-105 | 52 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 1e-104 | 52 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 4e-101 | 51 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-91 | 49 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 6e-91 | 49 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 1e-84 | 48 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-81 | 46 |
