Gene Information

Name : Pat9b_3050 (Pat9b_3050)
Accession : YP_004116905.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 3347155 - 3347502 bp
Length : 348 bp
Strand : -
Note : KEGG: kpu:KP1_4184 hypothetical protein; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19

DNA sequence :
ATGAGCAACATTATCAAGCAACTTGAACAAGAGCAGATGAAACAGGACGTACCTTCCTTCCGTCCGGGTGATACCGTGGA
AGTGAAAGTATGGGTCGTTGAAGGTTCTAAGAAACGTCTGCAGGCATTCGAGGGCGTGGTTATCGCTATTCGTAACCGCG
GTCTGCACTCTGCATTCACTGTTCGCAAGATTTCTAACGGCGAAGGCGTTGAGCGTGTCTTCCAGACTCACTCTCCGGTA
ATTGACAGCATCGCTGTTAAACGTCGTGGTGCTGTGCGTCAAGCCAAACTGTACTACCTGCGTGAGCGTACTGGTAAGTC
TGCTCGTATTAAAGAGCGTCTTAACTAA

Protein sequence :
MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPV
IDSIAVKRRGAVRQAKLYYLRERTGKSARIKERLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 9e-49 96
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 2e-27 58