Gene Information

Name : Pat9b_2869 (Pat9b_2869)
Accession : YP_004116725.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : LuxR family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 3149114 - 3149746 bp
Length : 633 bp
Strand : +
Note : KEGG: ypb:YPTS_2867 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR

DNA sequence :
ATGGACCAGCCAAAACTGACCATCATGATAGTAGATGACCATCCCTTAATGCGCCGTGGCATTCGCCAGTTGCTGGCGCT
GGAACCCAGACTTCAGGTGGTGGCCGAGGCCAATAATGGGACGGAAGCGCTGGCCGAGGCCCGTCGCTTGTCGCCGGATG
TCATTCTGCTCGACCTGAATATGAAAGGCATGTCCGGGTTGGATACGCTAAAAGCGTTGCGTCATGAGGAGATCTCCGCC
CGCATCCTGGTGTTGACCGTTTCTGACGCACGTAATGACATCTATGCCATGATCGATGCCGGGGCCGATGGCTATTTACT
GAAGGACAGTGAACCGGAGCTGCTGCTGCAACAGATCTTGTCGGGAGCACAGGGGGAAACCGTGTTCAGTGAAGTGGTCG
AAGAGTATCTCGCCAATCGACCACACAGCGCCAATCCGTTCCGCGAGTTAACCGAACGTGAACTGGATGTGTTACAGGAA
GTCGCGCGCGGCCTGTCGAATAAAGAGATCGCCACCACGCTGCATATCTCTGAAGAGACGGTAAAAGTGCACATTCGCAA
TCTGCTACGAAAATTGGATGTCCGCTCGCGCGTGGCCGCGACGGTACTGTGGCTGGAGAGCCGCAATGTCTAG

Protein sequence :
MDQPKLTIMIVDDHPLMRRGIRQLLALEPRLQVVAEANNGTEALAEARRLSPDVILLDLNMKGMSGLDTLKALRHEEISA
RILVLTVSDARNDIYAMIDAGADGYLLKDSEPELLLQQILSGAQGETVFSEVVEEYLANRPHSANPFRELTERELDVLQE
VARGLSNKEIATTLHISEETVKVHIRNLLRKLDVRSRVAATVLWLESRNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
narP YP_217238.1 transcriptional regulator NarP Not tested SPI-12 Protein 4e-64 65