|
Name : Pat9b_2856 (Pat9b_2856) Accession : YP_004116712.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 3130205 - 3132205 bp Length : 2001 bp Strand : + Note : KEGG: eta:ETA_10830 transketolase 2; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region DNA sequence : ATGTCTTCACGCAGAGAGTTGGCTAACGCGATTCGTGCCCTGAGCATGGACGCGGTACAAAAAGCGAATTCCGGCCACCC AGGTGCCCCGATGGGCATGGCGGATATTGCCGAAGTGCTGTGGCGCGATTTCCTCAAACACAACCCGACCAACCCCCACT GGCCCGATCGTGACCGCTTTATTCTCTCCAACGGCCATGCCTCGATGCTGCTGTATAGCCTGCTGCATCTCACCGGTTAT GACCTGCCAATGGAAGAATTGAAAAACTTCCGTCAGTTGCATTCGAAAACGCCGGGACACCCGGAGCTGGGATATACCCC CGGCGTGGAAACCACCACCGGGCCACTGGGCCAGGGGCTGGCGAATGCCGTAGGGATGGCCATTTCCGAGCGCACGCTGG CGGCACAGTTTAACCAGCCGGGGCATGACATCGTCGACCATTACACTTATGTGTTTATGGGCGACGGCTGCCTGATGGAG GGGATTTCGCACGAAGCCTGCTCACTGGCGGGGACGCTCGGGCTTGGTAAGCTGATCGGTTTTTACGACCACAACGGCAT CTCTATCGACGGGGAAACCGAAGGCTGGTTTACCGACGATACCCACAAACGCTTTGAAGCCTACAACTGGCATGTGATTG GCGATATCGATGGTCACGATCCGGCCGCCGTCGCCAGTGCCATCAAGGAGGCACAGAGCGTCACCGATAAACCGTCGTTG ATCATCTGTCGCACCATCATCGGCTTTGGTTCACCGAATAAAGCCGGTAAAGAGGAATCACACGGTGCCGCGCTGGGCGA AGCCGAAGTAGCACTGGCGCGTAAGCAACTGGGCTGGAATTATCCGCCCTTTGAGATCCCAAAAGACATCTATCAACAAT GGGATGCGAAAGAAGCCGGTGCCGCGCGGGAAAAAGCCTGGGACAGCAAATTTGCCGACTATCGAGCGGCGCATCCTGAG CTGGCGCAAGAATTTACCCGCCGTATGAACGGTGAAATGCCGACCAACTGGGAGAGCGAGGTCCAGGCATTTGTCGAACA GCTCCAGGCGAATCCGCAAAAAATTGCCAGCCGTAAAGCGTCGCAAAATACCCTTGAAGTGTTTGGCAAGCTGCTGCCGG AATTTCTCGGTGGTTCTGCCGACCTCGCGCCCAGTAATCTCACGATTTGGTCAGGTTCTAAGTCGATCAAAGAGGACATC GCCGGTAACTATATTCACTACGGCGTGCGTGAGTTTGGTATGACGGCGATCGGCAACGGTATCGCCCATCACGGCGGCTT TTTGCCTTATACCGCCACCTTCCTGATGTTTGTCGAATACGCCCGCAACGCGGCACGTATGGCCGCGTTGATGAAAGCGC GTCAGGTGCTGGTTTATACCCATGACTCGATTGGGCTGGGGGAAGATGGTCCAACGCATCAGCCGGTGGAGCAGCTGGCC AGCCTGCGACTGACGCCCAATATGAGCGTGTGGCGTCCCTGCGATCAGGTGGAAACCGCGATCGCCTGGAAGGCGGCAGT GGAACGTCACCACGGCCCGACGGCGCTGATCCTGTCGCGCCAAAACCTGTTACAACCGGAACGCAGTAAAGCGCAGGTCG CCGACATCGCCCGAGGCGGTTATGTGTTGCAGGATTGCAGCGGTACGCCGGAAGCCATCATCATTGCGACCGGTTCGGAG ATAGAAATCGCTCTCGGCGCGGCAGATAAACTGACTGCTGATGGTCATCAGATCCGCGTGGTGTCGCTGCCTTCGACCGA TGTATTTGATAAGCAGGATGCGGCTTATCGTGAGTCGGTGCTGCCCGCCGCAGTCAAAGCACGGGTGGCGGTAGAAGCCG GAATCGCCGATTACTGGTTCAAATATGTCGGCCTTGACGGTGCTATCGTTGGGATGACCACCTTTGGTGAGTCGGCCCCG GCCAGTAAGTTGTTCCCGGAATTTGGCTTTACGGTGGAGAACATCGTTAGCCATACTGCAGCGTTACTCAAGCCTCACTA A Protein sequence : MSSRRELANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWRDFLKHNPTNPHWPDRDRFILSNGHASMLLYSLLHLTGY DLPMEELKNFRQLHSKTPGHPELGYTPGVETTTGPLGQGLANAVGMAISERTLAAQFNQPGHDIVDHYTYVFMGDGCLME GISHEACSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTHKRFEAYNWHVIGDIDGHDPAAVASAIKEAQSVTDKPSL IICRTIIGFGSPNKAGKEESHGAALGEAEVALARKQLGWNYPPFEIPKDIYQQWDAKEAGAAREKAWDSKFADYRAAHPE LAQEFTRRMNGEMPTNWESEVQAFVEQLQANPQKIASRKASQNTLEVFGKLLPEFLGGSADLAPSNLTIWSGSKSIKEDI AGNYIHYGVREFGMTAIGNGIAHHGGFLPYTATFLMFVEYARNAARMAALMKARQVLVYTHDSIGLGEDGPTHQPVEQLA SLRLTPNMSVWRPCDQVETAIAWKAAVERHHGPTALILSRQNLLQPERSKAQVADIARGGYVLQDCSGTPEAIIIATGSE IEIALGAADKLTADGHQIRVVSLPSTDVFDKQDAAYRESVLPAAVKARVAVEAGIADYWFKYVGLDGAIVGMTTFGESAP ASKLFPEFGFTVENIVSHTAALLKPH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 75 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 67 |
