Gene Information

Name : Pat9b_2734 (Pat9b_2734)
Accession : YP_004116590.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : class I/II aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : -
Position : 3002931 - 3004148 bp
Length : 1218 bp
Strand : +
Note : PFAM: aminotransferase class I and II; KEGG: kpu:KP1_3927 aspartate aminotransferase

DNA sequence :
ATGAATTTTCAAATTGATAAATCCGGAAAGCTCGATAATGTCTGTTATGACATCCGTGGACCGGTACTGAAAGAGGCGAA
ACGTCTCGAAGAAGAAGGCAACAAAGTTCTCAAACTCAATATTGGCAACCCTGCCCCGTTTGGTTTTGAAGCCCCCGATG
AAATCCTGGTTGATGTCATCCGCAACCTGCCCAGCGCGCAGGGGTATTGTGACTCCAAAGGTCTCTACTCCGCACGCAAA
GCGATCATGCAGCATTATCAGGCGCGCGAAATGCGCGATATGACCGTTGAAGACATCTATATTGGTAACGGCGTATCCGA
ACTGATCGTGCAAGCCATGCAGGCCTTGCTGAACAGCGGCGATGAGATGTTGGTCCCCGCGCCTGATTACCCGTTATGGA
CTGCCGCCGTTTCGCTTTCCAGCGGTAAAGCCGTTCATTATCTGTGTGATGAATCCTCGGACTGGTTCCCGGACCTTGAT
GATATCCGTAGTAAAATCACGCCACGCACGCGCGGTATCGTGATCATCAACCCGAACAACCCGACCGGTGCGGTATACAG
CAAAGAACTGCTGTTGGAAATTGTCGAGATTGCGCGTCAGCATAACTTGATCATCTTCGCCGATGAGATCTACGACAAAA
TCCTGTATGACGAAGCCCAGCATCACTCGATTGCGGCGCTGGCACCGGATCTGTTGACTGTCACCTTTAACGGCCTGTCC
AAAACCTATCGCGTTGCCGGATTCCGTCAGGGCTGGATGGTGCTGAACGGCCCGAAAAAGCACGCTAAAGGTTATATTGA
AGGTCTGGAAATGCTGGCCTCAATGCGTCTGTGTGCCAACGTACCGGCACAACACGCCATCCAGACAGCGTTGGGCGGCT
ATCAGAGCATCAGCGAATTTATCGCACCCGGTGGGCGGTTATATGAGCAGCGCCAGCGCGCATGGGAATTGATCAATGAT
ATTCCTGGTGTCAGCTGTGTGAAACCACAGGGTGCGCTGTATATGTTCCCGCGTATCGATGCGAAGAAATTCAACCTGTT
CGACGACCAGAAAATGGTGCTCGATTTCCTGTTACAGGAAAAAGTACTGCTGGTTCAGGGCACCGCGTTCAACTGGCCGT
GGCCGGATCATGTGCGTATTGTGACCCTGCCGCGCGTCGACGATCTGGAAATGGCTATCAGTAAGTTTGGTCGTTTCCTG
CAAGGGTATCGTCAGTAG

Protein sequence :
MNFQIDKSGKLDNVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFEAPDEILVDVIRNLPSAQGYCDSKGLYSARK
AIMQHYQAREMRDMTVEDIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLD
DIRSKITPRTRGIVIINPNNPTGAVYSKELLLEIVEIARQHNLIIFADEIYDKILYDEAQHHSIAALAPDLLTVTFNGLS
KTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFIAPGGRLYEQRQRAWELIND
IPGVSCVKPQGALYMFPRIDAKKFNLFDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHVRIVTLPRVDDLEMAISKFGRFL
QGYRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-123 62
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-123 62
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 3e-123 62
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-123 62