Gene Information

Name : Pat9b_2647 (Pat9b_2647)
Accession : YP_004116503.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2903361 - 2904440 bp
Length : 1080 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: spe:Spro_3222 transport system permease protein

DNA sequence :
ATGCGTACCACGGAAGCCGCGCTGGTGGCGGAAAACAGCAACGATATCGATACCATGGCGCGCTATCGCCAGGTGCTGCG
CCAGCGGATGTTGCTGATTGGCGTACTGGTGCTGGCGATTCTGGCATCATTAATTCTCGACTTTACCCTCGGCCCGGCCG
GTCTTTCATTAGACACCCTGTGGCAAACCCTGACGCAACCTGACAGCGTTGATGCGGGGACACGGGTGATTGTCTGGGAT
ATTCGCCTGCCTTATGCGCTGATGGCGATTGTGGTGGGCTTCTCGCTCGGTCTTGCCGGTGCGGAAATGCAAACGATCCT
GAATAACCCCCTTGCCAGCCCCTTTACCCTTGGCGTCTCTTCTGCGGCTGCGTTTGGCGCGGCGCTGGCGATTATTCTCG
GCATTGGTATTCCCGGTGTGCCAGACCAATGGTTTATCTCGGCAAATGCCTTTATCTTCGCGCTGTTTGCCGCCCTGATG
CTGGATGGCGTTACGCGCTGGACACGGGTTTCCACCTCGGGCGTGGTGTTGTTTGGTATCGCGCTGGTATTCACCTTTAA
TGCGCTGGTGTCGATGATGCAGTTTATCGCCAGCGAAGACACGCTCCAGGGATTGGTGTTCTGGACGATGGGCAGCCTGG
CGCGCGCCTCCTGGGAAAAACTGGGGGTGCTGACCGCCGCATTTGCCATTCTGCTGCCTTTCTCAATGCTCAGTAGCTGG
AAGCTGACCGCGCTGCGCCTCGGCGAAGATCGTGCCATCAGCTTTGGTATCGACGTGCGTCGTCTGCGCCTCGCGACGCT
GCTGCGCATCAGTATCCTTTCCGCGCTGGCGGTGGCGTTTGTCGGGCCGATTGGCTTTATCGGCCTGGTGGCACCGCATA
TCGCGCGTATGATGTTCGGTGAAGACCATCGTTATTATCTGCCTGCCAGTGCCCTGACCGGCGCGCTGGTGCTGTCGTTG
GCTTCTGTGGCATCGAAAAACCTGATCCCCGGTGTCATCATTCCGGTTGGCATCGTGACCTCGCTGGTTGGCGTGCCGTT
CTTCCTGAGTATTATTTTGCGTCACCGGGGGAATGTGTGA

Protein sequence :
MRTTEAALVAENSNDIDTMARYRQVLRQRMLLIGVLVLAILASLILDFTLGPAGLSLDTLWQTLTQPDSVDAGTRVIVWD
IRLPYALMAIVVGFSLGLAGAEMQTILNNPLASPFTLGVSSAAAFGAALAIILGIGIPGVPDQWFISANAFIFALFAALM
LDGVTRWTRVSTSGVVLFGIALVFTFNALVSMMQFIASEDTLQGLVFWTMGSLARASWEKLGVLTAAFAILLPFSMLSSW
KLTALRLGEDRAISFGIDVRRLRLATLLRISILSALAVAFVGPIGFIGLVAPHIARMMFGEDHRYYLPASALTGALVLSL
ASVASKNLIPGVIIPVGIVTSLVGVPFFLSIILRHRGNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67369.1 putative permease Not tested PAI II CFT073 Protein 1e-87 76
irp6B NP_938505.1 membrane protein permease Irp6B Not tested Not named Protein 3e-52 46