Gene Information

Name : Pat9b_2558 (Pat9b_2558)
Accession : YP_004116414.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Virulence
Product : GtrA family protein
Function : -
COG functional category : S : Function unknown
COG ID : COG2246
EC number : -
Position : 2794585 - 2794995 bp
Length : 411 bp
Strand : +
Note : PFAM: GtrA family protein; KEGG: esa:ESA_03026 hypothetical protein

DNA sequence :
ATGCGTGTTCTGGTGACAAGATCGGGGTCGTTTTTGATTATGGGTGGCAAAATGTTCAAACGCTTCACCAGATATGCCTC
TATCGGCGTGATTAACACCATGATTCATTGGGTGATTTTTGGCGCAATGTACAATCTTGGTTTTAAACAGTCCGTGTCGA
ATTTCATTGCGTTTTGCGCTGCTGTCACCTTTTCATTTTTCGCCAACGCGCGTTGGACATTCAACGCTCAGGCCACAACG
TCTCGTTATCTCTTCTACACGGTATTTATGGGTGCGATGGCGCTGGCTGTGGGATGGGCTGCTGACCATGCCCATATCAA
CCCGATCTTCACCCTGATCCTGTTCTCCGTCGTCAGCCTGGTTTGTGGGTTCGCTTATTCAAAACTCTTTGTCTTCAGGG
AGAGTAAATGA

Protein sequence :
MRVLVTRSGSFLIMGGKMFKRFTRYASIGVINTMIHWVIFGAMYNLGFKQSVSNFIAFCAAVTFSFFANARWTFNAQATT
SRYLFYTVFMGAMALAVGWAADHAHINPIFTLILFSVVSLVCGFAYSKLFVFRESK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03026 YP_001439091.1 hypothetical protein Not tested Not named Protein 4e-26 60
gtrAI AAF09025.1 GtrAI Not tested SHI-O Protein 4e-28 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_2558 YP_004116414.1 GtrA family protein VFG0669 Protein 3e-28 56