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Name : Pat9b_2505 (Pat9b_2505) Accession : YP_004116362.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Virulence Product : type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3519 EC number : - Position : 2734747 - 2736621 bp Length : 1875 bp Strand : - Note : KEGG: pwa:Pecwa_2451 type VI secretion protein, VC_A0110 family; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 DNA sequence : ATGGACAGCAAACTGCTCGACTACTACAACCGTGAACTGGCCTATCTGCGAGAGATGGGAGCCGAGTTTGCCGAACGTTA TCCCAAAGTGGCAGGACGGCTGGGAATGCGCGGCATTGAGATCGCCGATCCTTACGTCGAGCGGTTGATGGAAGGCTTCG CGTTTCTCACCTCGCGTGTTCAGCTGAAAATGGATGCGGAATTTCCGCGTTTTTCGCAGCGACTGCTGGAGATGATTGCA CCGGGCTATTTAGCGCCAACACCGTCGATGGCGATTGCCCAATTGACACCGGATAGCCGCAAAGGGGACATCAGCAACGG TTTTCTGGTGCCGCGTGGCACCATGATGGAGAGCCAGAGCCTGAAGAAATCGGGCGTCACCTGTAGCTACACCACGGCGC ATGACGTGATGTTGCATCCGTTACGCATCAGCGATGTGACGCTCGGTGGCGTGCCCGGTGACATCCCGCTGGGTGAGCTG AAGTTGAGCGGCCTGGGTGCGACCAGCGCGTTGCGCCTGCGGATTGAGTGCGAAGGCGTTTCGTCGCTCAGCCAACTGAC GGTCGACGAGTTGATGCTCTACCTGAGCGGCCCGGATATTCAGGCGCTCAGGTTGCTGGAGTTGCTGATGCAGCATCGGG TCGGCATCGTGTTGCAATCGGTGGAGCCACAGCCGCAGCGTCAGGTACTCGCCGATAACGCGCTGCAACAACAGGGTTTT GCGCCGGAACAGGCGTTGTTACCGGACGATCTGCGCAACTTCGATGGCTACCGTCTGTTGCAGGAATATTTTGCCTTTCC GGCACGGTTTCAGTTTATCAGCCTGCATCAACTGGCGGCGCTGCTGCGCCGTTGCGAACATGCCAAAGCCTTCGACATCA TTATCCTGCTGGATAAGGCCGATGCTGAACTGGAGAGCGTGGTCGATCGCAGCCATCTGGCGCTGCATTGCACGCCGGTG ATTAACCTGTTCCCGAAAATGGCAGAGCGCCTGAAAGTCAGCGACAGTCAGCATGAATATCATCTGGTGGTGGATAATAT CCGCCCGCTGGATTACGAAGTGCATTCGGTACAACGTTTGTTTGCCACCGTGCAGGGACAGCGTGAGGAGCAGGTATTCC GTCCTTTCTGGAGCACTTTCAGCGCGGATAACGGTGACTACGGTGCCTATTTTTCCCTGCGTCGCGAGCAGCGCACGTTG TCCGAGCATGCGCAACGCTATGGCACCCGTACCGGTTATATCGGCTCTGAAGTGTTCCTCTCGCTGGTGGATGAACACCA CACACCGTGGCGCGACGATATGCGCTACCTCTCCGCTGAGGTGATGTGCACCAGCCGCGATTTACCGCTGATGCTGCTGC AACAGGAGCAGGGGCAGTTCGTGATGCCGGATTCGATCCCGGTGAGTCAACTGACGTTGTGCAAAGGGCCAACGCCGCCG CGTCCGGCACTGGCAGAAGGCTTATCGTCCTGGCGGCTGATCAGCCATCTGCAAATGAACTATCTGAGCCTGATGGACAG CGCCGACGGGGAAGGGGCGGCCGCCTTGCGCCAGCTACTGAGTTTGTATGCCAATCTGGCGGAAGCGCCAGTGGCGCGCC AGATCGAGGGCATTCGTCATTGCCAACTGCGTGCGGTACATCGGCGAGTACCGGAACCGGGACCCGTGGTGTTTGCTCGT GGGGTCAGCATTGCGCTGGAGGTGGATGAGCAGGTGTTCTCCGGGGCCAGTCCGTGGCTGTTTGGCAGCGTGCTGGAACG GGTGTTCTCGCGTCTGGTGGCGCTCAACAGTTTCACCGAACTCACGCTGAGCAGCCAGCAACGTGGCGAAGTGGGTTACT GGCCACCGCGGATGGGCCAGAAGGCGCTGCTATGA Protein sequence : MDSKLLDYYNRELAYLREMGAEFAERYPKVAGRLGMRGIEIADPYVERLMEGFAFLTSRVQLKMDAEFPRFSQRLLEMIA PGYLAPTPSMAIAQLTPDSRKGDISNGFLVPRGTMMESQSLKKSGVTCSYTTAHDVMLHPLRISDVTLGGVPGDIPLGEL KLSGLGATSALRLRIECEGVSSLSQLTVDELMLYLSGPDIQALRLLELLMQHRVGIVLQSVEPQPQRQVLADNALQQQGF APEQALLPDDLRNFDGYRLLQEYFAFPARFQFISLHQLAALLRRCEHAKAFDIIILLDKADAELESVVDRSHLALHCTPV INLFPKMAERLKVSDSQHEYHLVVDNIRPLDYEVHSVQRLFATVQGQREEQVFRPFWSTFSADNGDYGAYFSLRREQRTL SEHAQRYGTRTGYIGSEVFLSLVDEHHTPWRDDMRYLSAEVMCTSRDLPLMLLQQEQGQFVMPDSIPVSQLTLCKGPTPP RPALAEGLSSWRLISHLQMNYLSLMDSADGEGAAALRQLLSLYANLAEAPVARQIEGIRHCQLRAVHRRVPEPGPVVFAR GVSIALEVDEQVFSGASPWLFGSVLERVFSRLVALNSFTELTLSSQQRGEVGYWPPRMGQKALL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0289 | NP_454871.1 | hypothetical protein | Not tested | SPI-6 | Protein | 5e-124 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_2505 | YP_004116362.1 | type VI secretion protein | VFG2074 | Protein | 5e-135 | 46 |
