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Name : Pat9b_2503 (Pat9b_2503) Accession : YP_004116360.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2731041 - 2733647 bp Length : 2607 bp Strand : - Note : TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: pwa:Pecwa_2449 type VI secretion ATPase, ClpV1 family; SMART: AAA ATPase DNA sequence : ATGTCAGAAATCAGCCGAGCCGTGTTATTCGGTAAACTGGACACGCTGTTATTTACCTCGCTGGAAAGCGCCACCGCCTT TTGCAAGCTGCGCGGCAATCCCTATGTCGAGTTGGTGCACTGGTTGCATCAACTGATGCAGCAACAGGACGGTGACTTAC AGCAGGTAATCAGCCATTTTTCACTGGATGAAAACGCGCTGACGCGGGATATCGTGGCGGCACTTGACCGTCTGCCACGC GGTGCGAGTGCCGTCTCCGATCTTGCCGAGCACATCGACAGCGCCGTAGAGCGCGCCTGGGTCTATGCCTCGCTCAAATA CGGAGCCAGCCGCATTCGTGGCGGTCATCTGCTGATCGGTCTGCTCAAGACCTACAGCCTCGCCAGTGTGCTGAAAGGTA TTTCAGCGCAGTTTGCGCGTATTAACGTCGATGCCCTGGTGGATCAATTCGATGCTTTACTCGGCCAGAGCAAGGAGGCG CAACAGGCGCTGACGCAACCTGATGTCGGCGCAGCCCCGGCAGCAGCCGGCAGCAGCACTCTGGCACAGTACGCCCAGGA TCTTACCGCGCGTGCGCGTGCGGGCCGTATCGATCCGGTGACCGGGCGCGATGAAGAGATCCGTCAGATGGTGGATATCC TGATGCGCCGTCGTCAGAACAATCCGCTGCTGACCGGCGAAGCCGGTGTCGGCAAGACGGCGGTGGTGGAAGGGCTGGCA CTGCGCATTGCGGCGGGTGATGTGCCTGCGCCCTTGCGCGATGTACAACTTTGGCTGCTGGATATCGGCATGTTGCAGGC CGGGGCTGGGATGAAAGGGGAGTTTGAAGCGCGCCTGCAAGCGTTGATCAACGAAGTGCAGTCGAGCGCCACCCCGATTG TGTTGTTTGTGGATGAGATCCACACCCTGGTCGGCGCGGGCGGACAGCAAGGCACGGGGGATGCCGCTAACCTGCTGAAA CCGGCACTGGCACGTGGACAGTTGCGCACCATCGGTGCCACTACCTGGGCAGAATATAAAAAATATATCGAGAAGGACCC GGCACTGACACGTCGCTTCCAGACCGTGCAGGTGCAGGAGCCGGACGAAGCCAAAGCCATCCAGATGCTACGTAGCACGG TCAGTGCGCTGGAGAAACATCACCAGGTGCTGCTGCTGGATGAAGCGGTCAGTGCAGCGGTCAAACTGTCGCATCGTTAC ATCCCGGCGCGGCAGTTACCGGATAAAGCGGTGGCGTTGCTTGATACCGCCTGTGCACGTGTCGCCGTCAGTCAGGGGGC ACAGCCTCCGGCGCTGGAAGATTGTTTGCATCGGCTGGCGGCACTCGACATTGAAGCGGAAATTGCCGAGCGCGAGGCGA AAGTGGGGCTGGGTGCCCCCGAGCGCCAGCAGGAAATTGCCCGGCAGCATGCTGCACTCAGCGCCACGCGCGAGGCATTG ACCGCGCGCTGGCAGCAGGAACGTGCGCTGGTGGATCAACTCATCGCGTTACGTGCACGTTGTGTCAGCGAAGATGCAAC GGCGCTGCGCAGTGAGCTGGACGCCACCCGACAGCAGTTGCGTGAAGTGCAGGGCGAAGAACCGCTGCTGTTTGCCGCCG TGGATGCCAGCGTGGTGGCGGCCGTGGTGGCAGACTGGACCGGCATCCCACTGGGGCGCATGGTGAAAAACGAGATCGAT GCGGTGCTGAACCTGGCGGAAACCCTGAACCAACGGGTCATCGGTCAGCGCCATGGGTTGGATCTGATTGCGAAACGTGT GCGCACCTCACGCGCCCGTCTGGATAACCCCAACAAACCGGTCGGGGTGTTTATGTTGTGCGGCCCGTCTGGCGTGGGTA AAACCGAAACCGCGCTGGCGCTGGCCGAATCGCTGTATGGCGGCGAGCAGAACATCATCACCATCAACATGAGTGAATTC CAGGAAGCGCACACCGTCTCCACCTTGAAAGGCGCGCCTCCGGGCTATGTCGGTTACGGCGAGGGTGGTGTGCTGACCGA GGCGGTTCGCCGTCGGCCTTATAGTGTGGTGCTGTTGGATGAAATCGAGAAAGCACACCCGGATGTGCATGAGTTGTTCT TCCAGGTGTTCGACAAAGGCTGGATGGAGGACGGCGAAGGACGTCATATCGATTTCCGTAACACCATCATCATCCTGACC TCCAATGTGGGCACACAGCTGATCAGCGCCTTGTGTGCCGATCCGGAACTGTTACCGCAACCTGACGCACTCAGCACGGC ACTGCGCAAACCGCTGCTGGAGGTGTTCCCGCCCGCGTTGCTTGGACGCCTGCTGGTGGTGCCGTACTACCCGCTGAGCG ACGCGATGCTGGCACAAATCGTCCGGCTGCAACTGGCACGCATTGTGCGCCGTCTGGAGGAGAACCACGGTATCGCAGCG GACATTGACGCGAGTGTCGTCAGCCAGATCGTGCAGCGCTGCACCGAAGTGGAATCCGGCGGACGTATGGTCGATGCCAT CCTCACCAATACCCTGTTGCCGCAAATGAGCCAGATACTGCTCAGCGCCCATGCCCGCGATGAACGTTACCGCCGGGTGC TGGTGCGCTGTGAGCAGGGTGAGTTTGTTTGCCAGTTTGATGTCTAA Protein sequence : MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVISHFSLDENALTRDIVAALDRLPR GASAVSDLAEHIDSAVERAWVYASLKYGASRIRGGHLLIGLLKTYSLASVLKGISAQFARINVDALVDQFDALLGQSKEA QQALTQPDVGAAPAAAGSSTLAQYAQDLTARARAGRIDPVTGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGLA LRIAAGDVPAPLRDVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSATPIVLFVDEIHTLVGAGGQQGTGDAANLLK PALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVQEPDEAKAIQMLRSTVSALEKHHQVLLLDEAVSAAVKLSHRY IPARQLPDKAVALLDTACARVAVSQGAQPPALEDCLHRLAALDIEAEIAEREAKVGLGAPERQQEIARQHAALSATREAL TARWQQERALVDQLIALRARCVSEDATALRSELDATRQQLREVQGEEPLLFAAVDASVVAAVVADWTGIPLGRMVKNEID AVLNLAETLNQRVIGQRHGLDLIAKRVRTSRARLDNPNKPVGVFMLCGPSGVGKTETALALAESLYGGEQNIITINMSEF QEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHELFFQVFDKGWMEDGEGRHIDFRNTIIILT SNVGTQLISALCADPELLPQPDALSTALRKPLLEVFPPALLGRLLVVPYYPLSDAMLAQIVRLQLARIVRRLEENHGIAA DIDASVVSQIVQRCTEVESGGRMVDAILTNTLLPQMSQILLSAHARDERYRRVLVRCEQGEFVCQFDV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 56 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-117 | 46 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-117 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_2503 | YP_004116360.1 | type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 0.0 | 60 |
| Pat9b_2503 | YP_004116360.1 | type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 2e-136 | 48 |
