|
Name : Pat9b_2488 (Pat9b_2488) Accession : YP_004116345.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2709813 - 2711270 bp Length : 1458 bp Strand : - Note : KEGG: mno:Mnod_3732 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase DNA sequence : ATGTCGCGTATTCAACTGAAAGATGCAGATTTACTGCGCCAGCAGGCGTTGTTTGGCGGTCGCTGGCAGGATGCGCTGGC CGGGGCAACGCTGCCGGTGATTGATCCTTCGACCCAGACAACGCTGGCCACCATCCCGGCATTGGGTGCTGCTGAAACGG AGCAGGCGATAGATTATGCCGAGTCAGTGCGTATCAGCTGGGGCAAGACCCCAAACGCGACCCGTGCGGCGCTGCTGGAA AAATGGCATCAGCTGATTCTGGACCACGCCGATGATCTGGCGATCATCATGACTGCCGAGCAGGGCAAACCGCTGGCCGA AGCCAAAGGCGAAGTACTGTACGGTGCCAGCTTTGTGAAATGGTTTGCCGAAGAAGCCCGTCGTATCTATGGCGATACCA TTCCGGCCCCGAGTGAAGATCGTCGCATTCTGGTGCTGAAGCAGCCAGTCGGAGTGGCGGCGGCGATTACGCCGTGGAAC TTCCCGATTGCGATGATCACCCGCAAAGTGGCCCCGGCGCTGGCAGCAGGTTGTCCGATCATTGTTAAACCTTCGGAACT GACACCGCTCTCGGCGCTGGCACTGGCGGTACTGGCGGAACGCGCTGGCTTCCCGAGTGGGGTGCTACAGGTGCTGACGG GACTGCCGACTGAGATTGGCAGCACGCTGACCGCCAGCCGCACGGTGCGCAAAATCTCCTTTACCGGTTCAACCCGTGTC GGACAGCTGTTAATGCAGCAAAGTGCCGACAGCATCAAACGTCTGAGTCTTGAACTGGGCGGTAACGCGCCGCTGATCAT CTTTGATGATGCCGATTTGGACATTGCGGTGGCGGGGGTGATGGCGAGTAAGTTCCGCAACGCCGGTCAGACCTGCGTCT GCGCCAACCGCATTCTGGTGCAACGTGGTATCTATGAACGTTTTAGCCTCCGTCTGCTGGAGGCCGTAGCCACCCTGAAA GTGGGTGATGGCTTTGATGCACAAAGCACCATCGGCCCGTTGATCAACGATTGTGCCGTCGAGAAGGTGAACAGCCATAT TGATGATGCCCTCAGTCAGGGCGCAACCTTGCTGAGTGGTGGTATCAGCCAGCCTAATGGCACCTTTGTGCAGCCAACGG TGTTAGGCAATGTCACTAGCAAGATGCGCATTGCCCATGAAGAAACCTTTGGTCCGGTCGCACCGTTGTTTATTTTTGAC GAAGAAGACGAAGCGATCGCCATGGCGAATGATACGCCCTATGGGCTTGGCGCTTATTTCTTCACCGAAAATATTCGCCG GGCCTGGCGCGTTGCCGAGTCGCTGGAATTTGGGATGGTCGGATTTAATACCGGTGCAATTTCTTTAGACGCCGCACCAT TCGGCGGAATTAAATTATCCGGATTAGGACGCGAAGGTTCGCGCTACGGAATTGAAGAGTATCTGGAGCAGAAAACTTTC CATATTGGCAGTCTCTGA Protein sequence : MSRIQLKDADLLRQQALFGGRWQDALAGATLPVIDPSTQTTLATIPALGAAETEQAIDYAESVRISWGKTPNATRAALLE KWHQLILDHADDLAIIMTAEQGKPLAEAKGEVLYGASFVKWFAEEARRIYGDTIPAPSEDRRILVLKQPVGVAAAITPWN FPIAMITRKVAPALAAGCPIIVKPSELTPLSALALAVLAERAGFPSGVLQVLTGLPTEIGSTLTASRTVRKISFTGSTRV GQLLMQQSADSIKRLSLELGGNAPLIIFDDADLDIAVAGVMASKFRNAGQTCVCANRILVQRGIYERFSLRLLEAVATLK VGDGFDAQSTIGPLINDCAVEKVNSHIDDALSQGATLLSGGISQPNGTFVQPTVLGNVTSKMRIAHEETFGPVAPLFIFD EEDEAIAMANDTPYGLGAYFFTENIRRAWRVAESLEFGMVGFNTGAISLDAAPFGGIKLSGLGREGSRYGIEEYLEQKTF HIGSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 2e-125 | 59 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 3e-79 | 42 |
