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Name : Pat9b_2399 (Pat9b_2399) Accession : YP_004116257.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Virulence Product : flagellar biosynthetic protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 2611687 - 2612421 bp Length : 735 bp Strand : + Note : KEGG: eta:ETA_19980 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein DNA sequence : ATGATGCGTCGCTTGCTTCCCCTTCTGCCGCTGTTACTGCTGGCACCGGTTGCGCATGCGCAACTGCCAGGCCTGGTAAG CCATCCGCTGGCAAATGGTGGCCAGAGTTGGTCGCTGCCGGTGCAGACGCTGGTTTTTATCACCTCACTGACCTTTATTC CGGCCGTGCTGCTGATGATGACCAGTTTCACCCGCATCATTATTGTGTTCGGTTTGTTGCGCAACGCGCTTGGCACGCCC TCCGCACCGCCAAACCAGGTGCTGGTCGGTCTGGCGTTATTTCTCACCTTCTTCATCATGGCACCGACGTTCGACAAGAT TTATTCCGACGCCTATCTGCCGTTCAGTCAGGACAAGATCAGCATGGATGTCGCCATTGATAAAGGCGCACAACCGCTGC GTGAGTTTATGCTGCGTCAGACGCGTGAAGCCGATTTGGCACTGTTTGCCCGTCTGGCGAATACGCCGCCCATTGAGGGG CCGGAAGCGGTGCCGATGCGCATCCTGCTGCCTGCTTATGTCACCAGCGAGCTGAAAACGGCCTTCCAGATTGGTTTTAC CGTGTTTATTCCGTTCCTGATCATCGATCTGGTGGTTGCCAGCGTGTTGATGGCGCTGGGGATGATGATGGTCCCCCCCG CAACCATTTCGCTGCCCTTCAAGCTAATGCTGTTTGTCCTGGTGGATGGCTGGCAATTGCTGGTGGGTTCGCTGGCGCAA AGTTTCTATTCCTGA Protein sequence : MMRRLLPLLPLLLLAPVAHAQLPGLVSHPLANGGQSWSLPVQTLVFITSLTFIPAVLLMMTSFTRIIIVFGLLRNALGTP SAPPNQVLVGLALFLTFFIMAPTFDKIYSDAYLPFSQDKISMDVAIDKGAQPLREFMLRQTREADLALFARLANTPPIEG PEAVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLVGSLAQ SFYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 9e-27 | 43 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 9e-27 | 43 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 9e-27 | 43 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 5e-28 | 43 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 4e-29 | 42 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 5e-20 | 41 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 5e-20 | 41 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 4e-31 | 41 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 6e-21 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 5e-21 | 41 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 1e-29 | 41 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 1e-30 | 41 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-27 | 41 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 2e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_2399 | YP_004116257.1 | flagellar biosynthetic protein FliP | VFG2338 | Protein | 3e-95 | 89 |
| Pat9b_2399 | YP_004116257.1 | flagellar biosynthetic protein FliP | VFG2494 | Protein | 3e-74 | 68 |
| Pat9b_2399 | YP_004116257.1 | flagellar biosynthetic protein FliP | VFG1259 | Protein | 4e-64 | 60 |
| Pat9b_2399 | YP_004116257.1 | flagellar biosynthetic protein FliP | VFG2016 | Protein | 5e-60 | 55 |
| Pat9b_2399 | YP_004116257.1 | flagellar biosynthetic protein FliP | VFG0188 | Protein | 2e-32 | 41 |
| Pat9b_2399 | YP_004116257.1 | flagellar biosynthetic protein FliP | VFG0044 | Protein | 2e-31 | 41 |
| Pat9b_2399 | YP_004116257.1 | flagellar biosynthetic protein FliP | VFG0394 | Protein | 5e-31 | 41 |
