Gene Information

Name : Pat9b_0205 (Pat9b_0205)
Accession : YP_004114087.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 242227 - 242772 bp
Length : 546 bp
Strand : +
Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: eta:ETA_01500 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein

DNA sequence :
ATGTCTGAAGCTCCAAAAAAACGCTGGTACGTCGTGCAGGCGTTTTCCGGTTTCGAAGGCCGCGTAGCCCAGTCGCTGCG
TGAGCACATCAAATTGCACAACATGGAAGAGTTGTTTGGCGAAGTCATGGTGCCGACTGAAGAAGTCGTAGAAATCCGTG
GCGGCCAGCGTCGTAAAAGCGAGCGCAAATTCTTCCCAGGTTACGTACTGGTTCAGATGGTAATGAATGATGCCAGCTGG
CACTTGGTGCGTAGCGTACCGCGTGTGATGGGCTTCATTGGTGGTACATCAGACCGTCCAGCGCCGATCAGCGATAAAGA
AGTGGATGCGATCATGAACCGCCTGCAGCAGGTGGGTGATAAGCCGCGTCCAAAAACGCTGTTCGAGCCGGGCGAAATGG
TACGCGTCAACGACGGTCCGTTTGCCGACTTCAACGGTGTGGTGGAAGAGGTGGATTACGAAAAAAGCCGCCTGAAAGTT
TCTGTGTCCATCTTCGGTCGTGCTACCCCTGTCGAGCTGGATTTCAGCCAGGTAGAAAAAGGCTAA

Protein sequence :
MSEAPKKRWYVVQAFSGFEGRVAQSLREHIKLHNMEELFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASW
HLVRSVPRVMGFIGGTSDRPAPISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKV
SVSIFGRATPVELDFSQVEKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00341 YP_008207806.1 Transcription antiterminator Not tested AbaR25 Protein 6e-57 59
BJAB0868_00345 YP_008211671.1 Transcription antiterminator Not tested AbaR26 Protein 6e-57 59