Gene Information

Name : Pat9b_2066 (Pat9b_2066)
Accession : YP_004115935.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 2284984 - 2285682 bp
Length : 699 bp
Strand : -
Note : KEGG: eta:ETA_16270 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein

DNA sequence :
ATGCTGGAAGCGCTGAAGCAACAGGTGCTGGAAGCCAATCTGGATCTGCCACGTTACAACCTGGTGACCTTCACCTGGGG
CAATGTCAGTGCCCTCGATCGTGCGAGCGGTCTGCTGGTCATTAAACCTTCCGGGGTGAAATACGCGGATATGCAACGTG
ACGATATGGTGGTGGTGGAGCTGGAGAGCGGCAAGGTGGTGGAGGGTAAGATGCGCCCTTCATCCGACACCGCCACCCAT
CGCGCGCTGTACCTCGCCTGGCCGGAAATTGGCGGTATAGTCCATACCCATTCACGCCATGCGGCCATCTGGTCGCAGGC
GGGGCGCGACATTCTTGCCTGGGGTACCACCCACGCCGATGATTTCTACGGCACCATTCCCTGCACACGGGCTATGCGGC
GGGAAGAAATCGAACAGGATTATGAGTGGAATACCGGGCAAGTGATTATCGAGACCTTCGCCAAACGCGAAATATCGCCG
AGCGCTGTTCCGGCGGTGTTAGTCAATTCACATGGCCCGTTTGCATGGGGCAAAGATGCCGATGCAGCGGTACACAGCGC
GGTGGTACTGGAGGAGGTCGCCTATATGGCGCTGCATACCGAACAGTTGCATCAGACACTCCCACCGATTTCACAAACGC
TACTTGACCTGCACTACCTGCGCAAACACGGCAAAAACGCCTGGTATGGGCAGAAGTAA

Protein sequence :
MLEALKQQVLEANLDLPRYNLVTFTWGNVSALDRASGLLVIKPSGVKYADMQRDDMVVVELESGKVVEGKMRPSSDTATH
RALYLAWPEIGGIVHTHSRHAAIWSQAGRDILAWGTTHADDFYGTIPCTRAMRREEIEQDYEWNTGQVIIETFAKREISP
SAVPAVLVNSHGPFAWGKDADAAVHSAVVLEEVAYMALHTEQLHQTLPPISQTLLDLHYLRKHGKNAWYGQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 4e-59 55