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Name : Pat9b_2048 (Pat9b_2048) Accession : YP_004115918.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Virulence Product : Fis family sigma-54 specific transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG1221 EC number : - Position : 2260979 - 2261971 bp Length : 993 bp Strand : + Note : TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: ses:SARI_01279 phage shock protein operon transcriptional activator; SMART: AAA ATPase DNA sequence : ATGGCCAATGGCAACGACAATCTCCTCGGCGAATCAAATAACTTTCTTGAAGTGCTGGAACAGGTTTCGCGCCTCGCCCC GCTGGAAAAACCGGTGCTGGTGATTGGTGAGCGCGGAACCGGTAAGGAACTGATCGCCAGCCGCCTGCATTATCTCTCCG ATCGTTGGCAAGGCCCGTTCATCTCCCTCAACTGTGCCGCGTTGAATGAAAACCTGCTCGACTCCGAATTGTTTGGTCAT GAAGCGGGTGCCTTCACCGGTGCGCAGAAACGCCATTTGGGCCGTTTTGAACGCGCCGACGGCGGTACGCTGTTTCTGGA TGAACTGGCGACCGCGCCAATGCTGGTGCAGGAAAAACTGCTGCGCGTGATTGAATATGGGCAACTGGAACGCGTGGGTG GCAACCAGTCCTTGCAGGTCAACGTGCGACTGGTGTGCGCCACCAATGAAGATCTCCCGGCGCTGGCGGCGGCAGGCAAG TTTCGCGCCGACCTGTTGGATCGTCTGGCGTTTGATGTGGTGCAACTGCCGCCGCTGCGCGAAAGGCGCAGCGACATCCT GGTGATGGCGGAGCATTTTGCGATTCAAATGTGTCGCGAGCTGGGTTTGCCGCTCTTCCCCGGTTTTACCGAACAGGCGC AGCAAACGCTGTTGAATTACGCCTGGCCTGGCAATGTGCGTGAGCTGAAAAACGTGGTGGAACGTTCGGTCTATCGCCAT CACAGCGTCGACCTGCAACTGGATAACATCATTATCAATCCGTTTGCCGCGCGCAGTGCGCCCGTCGTGGCGACGGCAGC GCCTGACGCGCTACCCGCTTTGCCACTCGATCTGCGCCTATGGCAGAACCAGCAGGAGCGTCAGTTGGTGGATCGCAGCC TGGCAGAGGCGAAATATAACCAACGCCGTGCAGCGGATTTGCTGGGGGTAACTTATCACCAGTTGCGGGCGATGATGAAA AAGCACGGAATTCAGGTGCGGGACGAAGGTTAA Protein sequence : MANGNDNLLGESNNFLEVLEQVSRLAPLEKPVLVIGERGTGKELIASRLHYLSDRWQGPFISLNCAALNENLLDSELFGH EAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKLLRVIEYGQLERVGGNQSLQVNVRLVCATNEDLPALAAAGK FRADLLDRLAFDVVQLPPLRERRSDILVMAEHFAIQMCRELGLPLFPGFTEQAQQTLLNYAWPGNVRELKNVVERSVYRH HSVDLQLDNIIINPFAARSAPVVATAAPDALPALPLDLRLWQNQQERQLVDRSLAEAKYNQRRAADLLGVTYHQLRAMMK KHGIQVRDEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 1e-34 | 42 |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 1e-34 | 42 |
| hrpRS | ABA47311.1 | HrpRS | Virulence | S-PAI | Protein | 7e-34 | 41 |
