Gene Information

Name : Pat9b_2039 (Pat9b_2039)
Accession : YP_004115909.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Virulence
Product : redoxin domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2254470 - 2254970 bp
Length : 501 bp
Strand : +
Note : PFAM: Redoxin domain protein; KEGG: dze:Dd1591_1768 redoxin domain protein

DNA sequence : 
ATGTCTCAGAATGTTCACTTCCAGGGTAACCCGGTGCCGGTAGCAGGCCAGTTCCCGCAGGCAGGCGCACAGGCTAAACC
GTTCTCTCTGGTGGCTAAAGATCTCGCTGATGTGACCCTTTCTCAGTATGCAGGCAAACGCAAAGTCCTGAACATTTTCC
CGAGCATTGATACCGGTGTCTGTGCCGCTTCTGTGCGCAAGTTCAACGAACTGGCTGGCAAAGCTGACAACACCGTGGTG
CTGTGCATCTCTGCTGACCTGCCGTTTGCGCAGTCACGTTTCTGCGGCGCTGAGAGCCTGAACAACGTGGTGACGTTGTC
GACGCTGCGCGGTGCAGAATTTAAAGAAGATTACGGTGTCGCGATTGCAGATGGCGCACTGAAAGGCCTGACTGCCCGTG
CGGTGGTGGTGCTGGATGAGAACGATAAAGTGATTTACAGCGAACTGGTGAACGAAATCACCAGCGAGCCGAACTATGAT
GCGGCGCTGGCGGCGCTGTAA

Protein sequence : 
MSQNVHFQGNPVPVAGQFPQAGAQAKPFSLVAKDLADVTLSQYAGKRKVLNIFPSIDTGVCAASVRKFNELAGKADNTVV
LCISADLPFAQSRFCGAESLNNVVTLSTLRGAEFKEDYGVAIADGALKGLTARAVVVLDENDKVIYSELVNEITSEPNYD
AALAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 9e-36 48
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 4e-36 48
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 7e-36 48
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 3e-36 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_2039 YP_004115909.1 redoxin domain-containing protein VFG0087 Protein 1e-36 48