Gene Information

Name : Pat9b_1883 (Pat9b_1883)
Accession : YP_004115755.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 2086367 - 2087065 bp
Length : 699 bp
Strand : +
Note : KEGG: pct:PC1_2362 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein

DNA sequence :
GTGAGCTTATTAACCTTGAAACAACAGGTGCTGGAAGCCAACCTGGCGTTACCGCGCCATCAACTGGTCACCTTTACCTG
GGGCAACGTCAGCGCCATCGATCGTGCCAACGGCCTGGTGGCGATCAAACCTTCCGGCGTAGAGTACGACGGCATGACGG
TGGAGGATATCGTGGTGGTGGAGCTGGAAAGCGGTCGCATCGTTGAAGGCAGTAAAAAGCCATCCTCGGATACCGCTACC
CATCTGGCGCTGTATCGCGCATTTGCCGATATCGGCGGCATTGTGCATACCCATTCGCGCCATGCCACCATTTGGTCACA
GGCAGGGCAAGACCTGCCTGCCTGGGGAACGACCCATGCCGATTATTTCTACGGCACCATCCCCTGTACCCGGCTGATGA
CCGAGCAGGAGATCGTCGATGAATATGAATACCACACCGGACAGGTGATTATTGAAACCTTCCGCTCGCGCGGCATCAGC
CCGACAGCGATTCCGGCAGTATTGGTCAATGCCCATGGCCCCTTTGCCTGGGGCAAAGACGCCGACAACGCGGTGCATAA
TGCCGTGGTACTGGAAGAGATTGCTTATATGGGGATTTTTTCGCGCCAGCTGACGCCGGGGATTAAACATATGCAGCAGG
ATTTGCTGGATAAACACTTTCTCAGGAAGCACGGTGCGAATGCCTACTATGGGCAGTAA

Protein sequence :
MSLLTLKQQVLEANLALPRHQLVTFTWGNVSAIDRANGLVAIKPSGVEYDGMTVEDIVVVELESGRIVEGSKKPSSDTAT
HLALYRAFADIGGIVHTHSRHATIWSQAGQDLPAWGTTHADYFYGTIPCTRLMTEQEIVDEYEYHTGQVIIETFRSRGIS
PTAIPAVLVNAHGPFAWGKDADNAVHNAVVLEEIAYMGIFSRQLTPGIKHMQQDLLDKHFLRKHGANAYYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 4e-59 52