Gene Information

Name : Pat9b_1797 (Pat9b_1797)
Accession : YP_004115669.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Virulence
Product : putative sugar-specific permease SgaT/UlaA
Function : -
COG functional category : S : Function unknown
COG ID : COG3037
EC number : -
Position : 1993718 - 1995085 bp
Length : 1368 bp
Strand : +
Note : PFAM: putative sugar-specific permease SgaT/UlaA; KEGG: spe:Spro_2256 ascorbate-specific PTS system enzyme IIC

DNA sequence :
ATGAATAGTGTTATTAACTTCCTGGTAAAAGATTTACTGGGGCAGGCATCGATTCTGATCGCCTTTATTGCCCTGGTGGG
TCTGCTGCTACAAAAAAAATCCGCAGGTAAGGTGGTGGAAGGCACCTTTAAAACCCTGCTCGGTTTCTTAATTATGATGG
CAGGTATCAACATCATTGTGGGTACGCTGACCTTCCTGAATACCATCTTTACCCACGGCTTTGGCATGCAAGGTTACATC
ACCGATGTTGCCGCCATCGCCGGGTTAGCGAACCGCGAGCTGGGTTCAGAAGTGGCGCTGACGCTGTTGGTGATTTTTAT
CGTCAACATCATTATTGCCCGCCTGACACCGTTCAAATACATCTTCCTTACCGGTCAGGCGCTGCTGTGGATGGCGACCA
TCGGTGCGGTGATCGGCTACAAAGCGGGGCTGACAGGCTTACCTCTGATCCTTACTGGCGGCATTTTTGGTGGCGTGATG
GCGGTGGTAATGCCCGCGCTGGCACAACCGGTGGTACGCCGCATCACCGACTCGGACGATGTTGCCCTCGGTCACTTCTG
CACCATCGGCTATCTGGTCACTGCGGCGGTCGCAAAAGTGGTGGGTAAAGGCTCGCGCTCCACCGAAGACCTGAAACTGC
CGGATAACTTCAAGTTCCTGCAAGACACCTATCTGTCGATGGCCGTGGTGATGGTGCCGATGTACCTGATCCCCGCACTG
GCGGCAGGCCCGGCGTTTATCGCCCAGTACAGCAACGGTATGAACTACCTGATGTACGCCTTTATGCAATCGATTCAGTT
CGTGTGTGGGGTGTTTGTGCTGTATAGCGGTGTACGTCTGCTGCTGAATGAACTGGTGCCAGCGTTCCGTGGTATTGCGA
TGCGCATCGTGCCGGATGCAAAACCCGCGCTTGATTGCCCGGTGATGTTCCCCTATGCACCGAATGCCGTCATCGTTGGC
TTCCTCGCCACCACCCTCGGTTCCGTCGTCGGGATGCTGGTATTCCCGATGTTCGGTCTGGCGATGATCTTGCCAGGGCT
GCTGACCAACTTCTTTGCCGGTGGCACGGCCGGGGTGTTTGGTAACGCACTGGGTGGCCGTCGTGGCGCGATGATTGGCG
GTTTTGTCCACGGCCTGTTTATTACGCTGCTGCCGGCCATTCTGGTGCCGATGCTGGAAAGCTACGGTTTCACCGGCGTG
ACCTTCAGCGATTCCGACGTGATCAGCACCGGCCTGGTACTGGGTCATGCCTTCCAGAATAACTGGCTGTTCGTCGCCCT
GTTTATTGTCTTCATTACCCTGATCGCCTGGTTTGTTAACGGAAAATCCACTAAGCCCCACGAGGAAAATATTCATGAAA
CTTTATAA

Protein sequence :
MNSVINFLVKDLLGQASILIAFIALVGLLLQKKSAGKVVEGTFKTLLGFLIMMAGINIIVGTLTFLNTIFTHGFGMQGYI
TDVAAIAGLANRELGSEVALTLLVIFIVNIIIARLTPFKYIFLTGQALLWMATIGAVIGYKAGLTGLPLILTGGIFGGVM
AVVMPALAQPVVRRITDSDDVALGHFCTIGYLVTAAVAKVVGKGSRSTEDLKLPDNFKFLQDTYLSMAVVMVPMYLIPAL
AAGPAFIAQYSNGMNYLMYAFMQSIQFVCGVFVLYSGVRLLLNELVPAFRGIAMRIVPDAKPALDCPVMFPYAPNAVIVG
FLATTLGSVVGMLVFPMFGLAMILPGLLTNFFAGGTAGVFGNALGGRRGAMIGGFVHGLFITLLPAILVPMLESYGFTGV
TFSDSDVISTGLVLGHAFQNNWLFVALFIVFITLIAWFVNGKSTKPHEENIHETL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 8e-79 44
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 8e-79 44
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 8e-79 44