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Name : Pat9b_1728 (Pat9b_1728) Accession : YP_004115600.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Virulence Product : betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 1914165 - 1915631 bp Length : 1467 bp Strand : + Note : KEGG: eta:ETA_17820 betaine aldehyde dehydrogenase; TIGRFAM: betaine aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase DNA sequence : ATGGCTGACATTACGCGCTGCGGCTTATATATCAATGGTCAGGCGTGTCCGGGTAACGGGCCGCTGTTTACTACCATCAA CCCGGCGAATGGCGAGGTGCTGGCAGAAATTACCTCCGCCAGTCGTGAAGATGTGGATCGCGCGGTCGCTACCGCGCGCG AAGGACAGCGCATCTGGCGAGGCTATACACCGGTGGAACGCAGTCGCGTGCTGTTAAAAGCCGTTGCTTTACTGCGTGAA CACAATCAGAGGCTGGCAGAACTGGAAACCGCCGATACCGGCAAGCCAATCAGTGAAACGGCAGCGGTTGATATCGTCAC CGGAGCGGACGTGCTGGAATATTACGCCGGTCTGGCTCCGGCATTACAGGGCGAGCAAATCCCACTGCGCGATAGCGCAC TGGTCTACACCCGCCGTGAACCGCTGGGCGTCTGTGCCGGTATTGGCGCCTGGAACTACCCGATTCAAATCGCCTTGTGG AAAAGCGCCCCGGCGCTGGCTGCGGGTAATGCCATGGTGTTTAAGCCCAGTGAAGTCACACCGCTGAGTGCACTGGAGCT GGCGAAAATCTACAGCGAAGCCGGGCTACCGGATGGCGTATTTAATGTGGTGCAGGGCGCGGGCGAGGTTGGACAGGCGC TGAGTCAGCATCCGGATATCGATAAAGTCTCCTTCACTGGCGAAGTCAGCACCGGTAAACGGGTGATGGCGGATGCCGCA CTGGCCAATCTGAAAGAGGTCACCATGGAGCTGGGCGGTAAATCGCCGCTGATCGTGTTTGCGGATGCCGATGTGGAGCG TGCTGTTGATGGCGCGCTGATGGCGAATTTCTACAGCAGTGGTCAGGTCTGTACCAATGGCACCCGGGTGTTTGTCCATC GCAGCATCCAGGCGCAGTTTGAGCAGCGCCTGCTGGAGAAAATGCAGGGCATCCGTATGGGCGATCCGCGCGATGCCACG GTGAATTTCGGCCCACTGGTCAGCGAGCAGCATTGCCGCAAAGTTGAGAGCTACCTGAAACTCGGCAAGGAGCAAGGCGC ACGCCTGCTGGCGGGGGGGCACCGCATTATCGACGGTCCGCTGGCGCGTGGTTGCTACATCGAACCGACGGTGTTCAGTG ATTGCCACGATGAAATGCAGATTGTGCGTGAGGAGATCTTCGGCCCGGTAATGAGCATCCTCACCTTCGACAGTGAAGAA GAAGTGATACGCCGGGCTAACGATACCGAGCTGGGGTTGGCCGCCGGGATCTTCACCCGCGACCTGAACCGTGCCCATCG GGTGATCCATCAGATAGAGGCGGGGATCTGCTGGATTAACAGCTGGGGTGAATCGCCCGCACCGATGCCGGTGGGAGGGT ATAAGCAATCCGGTCTGGGGCGTGAAAACGGCATCGCCACGTTGCAACACTACACGCGCACCAAATCGGTGTTGATTGAG TTGGGCGACTACCCGAGCGCATTTTGA Protein sequence : MADITRCGLYINGQACPGNGPLFTTINPANGEVLAEITSASREDVDRAVATAREGQRIWRGYTPVERSRVLLKAVALLRE HNQRLAELETADTGKPISETAAVDIVTGADVLEYYAGLAPALQGEQIPLRDSALVYTRREPLGVCAGIGAWNYPIQIALW KSAPALAAGNAMVFKPSEVTPLSALELAKIYSEAGLPDGVFNVVQGAGEVGQALSQHPDIDKVSFTGEVSTGKRVMADAA LANLKEVTMELGGKSPLIVFADADVERAVDGALMANFYSSGQVCTNGTRVFVHRSIQAQFEQRLLEKMQGIRMGDPRDAT VNFGPLVSEQHCRKVESYLKLGKEQGARLLAGGHRIIDGPLARGCYIEPTVFSDCHDEMQIVREEIFGPVMSILTFDSEE EVIRRANDTELGLAAGIFTRDLNRAHRVIHQIEAGICWINSWGESPAPMPVGGYKQSGLGRENGIATLQHYTRTKSVLIE LGDYPSAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 2e-81 | 43 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-75 | 41 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-76 | 41 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-76 | 41 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 5e-76 | 41 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 5e-73 | 41 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 7e-76 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pat9b_1728 | YP_004115600.1 | betaine aldehyde dehydrogenase | VFG0082 | Protein | 5e-76 | 41 |
