Gene Information

Name : Pat9b_1707 (Pat9b_1707)
Accession : YP_004115579.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1892700 - 1893410 bp
Length : 711 bp
Strand : +
Note : KEGG: etw:ECSP_1219 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGATGACAAACAGCATACAGGCGTTACCCGCAATACAACTTATCGATGTATGGAAAAGTTATGGTTTGGGTGAAAATAA
AGTTGATGCGTTAAAGCATATTAATCTGGAGATCAAGAAAGGTGAGTTTCTCGCGCTGTGTGGTCCTTCGGGGAGCGGTA
AAAGTACGTTATTAAATATTTTGTCAGGAATCGACAAGCCAACGCGAGGGGAAACGTTATTTCTGGATAAAGCGCTCAAC
GATCTGAATGAAAATCAACTCTCTGCTATCAGAAGTAAATGTCTGGGTTTCATCTTTCAGTTCTTCAATCTTATTCCCGT
ATTGAGTGCATTTGATAACGTATATTACCCGTTGATTTTGAATGGCAATTATAGCAGGAAAGCCGCCAGGGAATTGGCGT
CGCACTATCTCGATAGTGTGGGAATCAACGCACTGCGTGACCGCTGTCCGGGACAACTCTCCGGCGGCCAGCAACAACGT
GTGGCGATCGCCCGAGCGTTAGCGAATAAACCCGCGGTGGTCGTTGCCGATGAGCCAACCGGAAACCTCGATTTAGCTAC
CGGCGAGGCGATCCTTGATCTGTTGATGAAGATTAACCAGGAGACGGGCACGACATTTATTATTTCAACACACTCTACGC
AATTAAAGGACCGCGCCAAACGTGTTATTGAAATCAAGGATGGAGAGTTAGTCGGTGATACAGCGCTATAA

Protein sequence : 
MMTNSIQALPAIQLIDVWKSYGLGENKVDALKHINLEIKKGEFLALCGPSGSGKSTLLNILSGIDKPTRGETLFLDKALN
DLNENQLSAIRSKCLGFIFQFFNLIPVLSAFDNVYYPLILNGNYSRKAARELASHYLDSVGINALRDRCPGQLSGGQQQR
VAIARALANKPAVVVADEPTGNLDLATGEAILDLLMKINQETGTTFIISTHSTQLKDRAKRVIEIKDGELVGDTAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-32 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-30 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_1707 YP_004115579.1 ABC transporter-like protein NC_012469.1.7686878. Protein 4e-41 48
Pat9b_1707 YP_004115579.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-34 42
Pat9b_1707 YP_004115579.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-37 41
Pat9b_1707 YP_004115579.1 ABC transporter-like protein CP001581.1.gene798.p Protein 6e-37 41