Gene Information

Name : Pat9b_1674 (Pat9b_1674)
Accession : YP_004115546.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1856653 - 1858065 bp
Length : 1413 bp
Strand : -
Note : TIGRFAM: pyruvate kinase; KEGG: etr:ETAE_1850 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta

DNA sequence : 
ATGAAAAAGACCAAGATCGTTTGTACTATCGGTCCGAAAACCGAATCGGAAGAGATGCTGACTCAACTGCTGGAAGCAGG
CATGAACGTCATGCGCCTGAACTTCTCTCACGGGGATTATGCCGAACATGGTCAGCGCATTACCAACATGCGTGCTGTCA
TGGAAAAAACCGGTCGTCAGGCCGCCATTCTGCTGGATACCAAAGGTCCGGAAATCCGCACCATGAAACTGGAAGGCGGC
AATGACGCCCCACTTAAAGCCGGCCAGACCTTCACCTTCACCACTGACCAGTCGGTTATCGGTAATAGCGAGCGCGTTGC
CGTCACCTATGCTGGCTTTACTGAAGACTTGAAAATCGGCAACACCGTGCTGGTCGATGATGGCCTGATCGGTATGGAAG
TGATTGAAGTCACCGAAAACACCGTGGTGTGTAAAGTGCTGAACAACGGCGACCTTGGCGAGAACAAAGGCGTCAACCTG
CCAGGTGTCTCCATTCAGCTGCCTGCGCTGGCGGAAAAAGACAAACGTGACCTGATTTTCGGTTGTGAACAAGGTGTCGA
CTTCGTTGCGGCTTCCTTTATCCGTAAACGCTCTGACGTGCTGGAAATCCGTGAACACCTGAAACAGCACGGTGGCGAAC
ACATTCAGATCATCTCGAAAATCGAGAACCAGGAAGGTCTGAATAATTTCGACGAAATTCTCGAAGCCTCTGACGGCATC
ATGGTGGCACGTGGCGATCTCGGCGTTGAGATCCCGGTTGAAGAAGTGATCTTCGCGCAGAAGATGATGATCAAGAAGTG
CAACAAAGCACGCAAAGTGGTGATTACCGCGACGCAGATGCTCGATTCGATGATCAAAAACCCGCGTCCAACCCGCGCTG
AAGCAGGCGATGTGGCGAACGCCATCCTCGACGGCACCGATGCAGTGATGCTGTCTGGCGAGAGCGCGAAAGGGAAGTAT
CCGCTGGAATCGGTCACTATCATGGCGACCATCTGCGAACGCACTGACCGCGTGATGAAATCACGCATTGACTCGCTCCA
GGACTCACGCAAGCTGCGTATTACTGAAGCGGTATGTCGTGGTGCCGTTGAAACCGCTGAGAAACTGGAAGCACCGCTGA
TCGTGGTGGCGACCGAAGGTGGTAAATCAGCCAAAGCCATCAGAAAATACTTCCCTGATGCGACCATCCTGGCATTGACC
ACCAATGCTACCACTGCACGCCAGCTGATTCTGAGCAAAGGTGTTGAGACTCACCTGGTGGCCGAAATTGCCTCAACTGA
TGATTTCTATCGTATCGGAAAAGAAATGGCCCTTGAGAGCGGTTATGCGCAAAAAGGCGATGTCGTCGTGATGGTTTCTG
GTGCACTGGTGCCAAGCGGCACCACCAACACCGCATCCGTACACGTACTCTGA

Protein sequence : 
MKKTKIVCTIGPKTESEEMLTQLLEAGMNVMRLNFSHGDYAEHGQRITNMRAVMEKTGRQAAILLDTKGPEIRTMKLEGG
NDAPLKAGQTFTFTTDQSVIGNSERVAVTYAGFTEDLKIGNTVLVDDGLIGMEVIEVTENTVVCKVLNNGDLGENKGVNL
PGVSIQLPALAEKDKRDLIFGCEQGVDFVAASFIRKRSDVLEIREHLKQHGGEHIQIISKIENQEGLNNFDEILEASDGI
MVARGDLGVEIPVEEVIFAQKMMIKKCNKARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKY
PLESVTIMATICERTDRVMKSRIDSLQDSRKLRITEAVCRGAVETAEKLEAPLIVVATEGGKSAKAIRKYFPDATILALT
TNATTARQLILSKGVETHLVAEIASTDDFYRIGKEMALESGYAQKGDVVVMVSGALVPSGTTNTASVHVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 0.0 88
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 0.0 88
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 0.0 88
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 0.0 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_1674 YP_004115546.1 pyruvate kinase VFG0479 Protein 0.0 88