Gene Information

Name : Pat9b_0155 (Pat9b_0155)
Accession : YP_004114038.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 183396 - 184337 bp
Length : 942 bp
Strand : -
Note : KEGG: eta:ETA_02120 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase

DNA sequence :
ATGTTAGACAAAATTTTCAGAATTGCTACAAGACAAAGTCCCCTTGCGCTCTGGCAGGCACAATATGTCCAGCAACGCCT
GATGGCAGCGCATCCTGGCCTGCAAGTCGAACTGGTCCCGATGGTCACCAAGGGTGATGTCATCCTCGATACGCCGTTGG
CTAAAGTGGGGGGAAAAGGGCTTTTCGTCAAGGAGCTGGAGTTGGCGATGCTGGAAAATCGCGCCGACCTCGCGGTGCAT
TCGATGAAAGATGTGCCGGTGGATTTCCCTGAAGGACTCGGCCTGGTCACCATTTGCGAGCGCGAAGATCCGCGCGATGC
CTTTGTCTCCAATCATTACGATTCAATCGATGCGCTGCCGCAGGGCGCGGTGGTGGGCACTTCAAGCCTGCGTCGTCAGT
GCCAGCTCAGCGCACGTCGTCCCGACCTGGTGATTCGCTCGTTGCGCGGCAACGTCGGTACCCGCCTTGGCAAACTGGAT
GCCGGTGAATATGACGCCATCATTCTTGCCGCTGCGGGTCTGAAACGCTTGGGTCTGGAAGATCGCATCCGCTTTGCGTT
ACCGGCTGAAATCTCGTTACCGGCCGTCGGTCAGGGCGCAGTCGGCATTGAATGCCGCCTCGACGACGCCGAACTGATTA
CCCTGTTGCAGGCGCTGAACGACGGCGACACCGCTGTTTGTGTGCGCGCTGAACGCGCCATGAACACCCGCCTGGAAGGC
GGTTGTCAGGTGCCGATTGGCAGCTTTGCCGTGCTGGAAGGCGATCAGCTGTGGCTGCGTGGTCTGGTGGGTTCACCGGA
TGGTAGCCAGATGATCACCGGCGAGCGCCGTGGTCCACGTGATCAGGCAGAACAGATGGGGATTTCGCTGGCGGAAGAAC
TACTGGATAACGGCGCGAGCGAGATTCTGCGTGACGTTTATCAGGGGCAACCGCCTGCATGA

Protein sequence :
MLDKIFRIATRQSPLALWQAQYVQQRLMAAHPGLQVELVPMVTKGDVILDTPLAKVGGKGLFVKELELAMLENRADLAVH
SMKDVPVDFPEGLGLVTICEREDPRDAFVSNHYDSIDALPQGAVVGTSSLRRQCQLSARRPDLVIRSLRGNVGTRLGKLD
AGEYDAIILAAAGLKRLGLEDRIRFALPAEISLPAVGQGAVGIECRLDDAELITLLQALNDGDTAVCVRAERAMNTRLEG
GCQVPIGSFAVLEGDQLWLRGLVGSPDGSQMITGERRGPRDQAEQMGISLAEELLDNGASEILRDVYQGQPPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 8e-89 62
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 8e-89 62