Gene Information

Name : Pat9b_1541 (Pat9b_1541)
Accession : YP_004115414.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : lytic transglycosylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0741
EC number : -
Position : 1713269 - 1713880 bp
Length : 612 bp
Strand : +
Note : PFAM: Lytic transglycosylase catalytic; KEGG: eta:ETA_19360 membrane-bound lytic murein transglycosylase E

DNA sequence :
ATGCTCTCTGCGCTATTGTTGGCAGGCTGTGCCAGCGAACCGCAGACCGTGGTAACGCCAGAGAAGAATACACCTTTAAC
CCAGGCTCCACCGTCAAAAATCACCGACGCCTGGTCAATGTTTACTGAAGATGCCGCCAGTCATTATGGCGTTGATGAAA
AGCTTATCAGCGCCATTATTAGTGTCGAATCAGGGGGCAACCCCACTGTGATCAGCCGTTCCAATGCGGTTGGTTTGATG
CAGATTAAAGCCGCCACGGCGGGTCGCGCGGTGTATCGCGCCCAGGGTCGTCGGGGCCAGCCGACCTCATCCGAGTTACG
CGATCCGGCAAGGAATATCGATATTGGCGCGGCCTATATCCGTATTTTGCAGGAGTCCGAACTGGCGGGCATTCGTGATC
CGCTGACCTTGCGTTACGCGACCATCGTCTCCTATGCCAACGGTGCTGGTGCGCTGCTGCGAACCTTCTCACGTGACCGC
GACCGTGCCATTGCCATGATCAATGACATGACGCCGGACGAGTTTTATCAACACGTACAGAATAAACATCCGGCCGCCCA
GGCTCCGCGTTACCTGTGGAAAGTGACCACGGCGTATCGCACCATCGGTTAA

Protein sequence :
MLSALLLAGCASEPQTVVTPEKNTPLTQAPPSKITDAWSMFTEDAASHYGVDEKLISAIISVESGGNPTVISRSNAVGLM
QIKAATAGRAVYRAQGRRGQPTSSELRDPARNIDIGAAYIRILQESELAGIRDPLTLRYATIVSYANGAGALLRTFSRDR
DRAIAMINDMTPDEFYQHVQNKHPAAQAPRYLWKVTTAYRTIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
o241 AAC61708.1 O241 Not tested PAI I CFT073 Protein 2e-44 61