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Name : Pat9b_1320 (Pat9b_1320) Accession : YP_004115197.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 1478531 - 1479823 bp Length : 1293 bp Strand : + Note : KEGG: eta:ETA_21510 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTCGATCCCAATCTGCTGCGTAACGAGCCAGACGCAGTCGCAGAAAAACTGGCACGCCGGGGATTTAAACTGGATGT GGAAACGCTGCGCTCCCATGAAGAGCGTCGTAAAGTATTGCAGGTAGAAACGGAAAATCTGCAGGCTGAGCGTAACTCCC GATCCAAATCCATCGGTCAGGCCAAAGCACGTGGGGAAGATATCGAGCCGCTGCGTCAGGAAGTGAACGTGCTGGGCGAA CGCCTGGACGCGGCAAAAGCAGAACTGGATGCCCTGCAAAACGAAATCCGTGATTTTGCTCTGGCCCTGCCTAACTTGCC GGCAGACGAAGTGCCGTTGGGTAAAGATGACACGGAAAACCTCGAAGTTGCACGCTGGGGTGAGCCACGTCAGTTCGATT TCCAGGTGAAAGATCACGTTGAACTGGGTGAACTGGCGAAAGGTTTAGATTTCGCTTCAGCGGTGAAGCTGACCGGTTCA CGCTTTGTGGTGATGCAGGGACAAATTGCCCGTCTGCATCGCGCTCTGAGTCAATTTATGATTGACCTGCACACCCAGCA ACACGGTTATCTTGAGACCTATGTGCCTTATCTGGTGAACCATGACACGCTGTATGGTACTGGTCAGTTGCCGAAATTTG GTGAGGACCTGTTTCACACCAAACCGCTGGATGAAGAAGCGGGTAGCAGCAACTATGCGTTGATTCCGACCGCTGAAGTG CCGCTGACCAACCTGGTACGCGATGAGATCGTCGAAGAAGAGAACCTGCCGATCAAACTGACCGCACACACCCCGTGCTT CCGTTCAGAAGCGGGCTCCTACGGTCGTGATACTCGTGGTCTGATCCGTATGCACCAGTTCGACAAAGTCGAGATGGTGC AGATCGTCGCACCGGAAACCTCAATGCAGGCGCTGGAAGAGTTGGTTGGTCATGCCGAGAAGGTGCTGCAACTGCTTAAC CTGCCGTACCGTAAAGTGCTGCTGTGCACCGGCGACATGGGCTTTGGTTCAACCAAGACCTATGACCTCGAAGTCTGGTT ACCGGCGCAAAATACTTACCGCGAAATCTCCTCCTGCTCCAACATGTGGGATTTCCAGGCGCGTCGTATGCAGGCGCGTT GCCGTAGCAAGACCGAGAAGAAACCGCGTCTGCTGCATACGCTGAATGGTTCTGGTCTGGCGGTGGGGCGTACCCTGGTT GCCGTGCTGGAAAACTATCAGCAGGCCGATGGCCGTATTGAAGTGCCAGAAGTTCTGCGTCCGTATATGGGCGGCATTGA ATTTATTGGTTAA Protein sequence : MLDPNLLRNEPDAVAEKLARRGFKLDVETLRSHEERRKVLQVETENLQAERNSRSKSIGQAKARGEDIEPLRQEVNVLGE RLDAAKAELDALQNEIRDFALALPNLPADEVPLGKDDTENLEVARWGEPRQFDFQVKDHVELGELAKGLDFASAVKLTGS RFVVMQGQIARLHRALSQFMIDLHTQQHGYLETYVPYLVNHDTLYGTGQLPKFGEDLFHTKPLDEEAGSSNYALIPTAEV PLTNLVRDEIVEEENLPIKLTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVAPETSMQALEELVGHAEKVLQLLN LPYRKVLLCTGDMGFGSTKTYDLEVWLPAQNTYREISSCSNMWDFQARRMQARCRSKTEKKPRLLHTLNGSGLAVGRTLV AVLENYQQADGRIEVPEVLRPYMGGIEFIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-106 | 55 |
