|
Name : Pat9b_1269 (Pat9b_1269) Accession : YP_004115146.1 Strain : Pantoea sp. At-9b Genome accession: NC_014837 Putative virulence/resistance : Unknown Product : oligopeptide/dipeptide ABC transporter ATPase Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1422798 - 1424654 bp Length : 1857 bp Strand : + Note : TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: eta:ETA_21910 putative ABC transporter ATP-binding protein; SMART: AAA ATPase DNA sequence : ATGACGGATCGGCAGCTGCAATTAACGCCAGACCAGGTTCTGGCAGTACGGGACCTGAACGTAAGTTTCCAGCATGAAGG ACGTATCACCGAAGCGGTGCGCCAGCTCTCGCTTGATCTGCATCGTGGTGAAACCCTGGCGCTGGTGGGGGAGTCCGGTT CCGGTAAATCGGTCACTTCGCTGGCGTTGATGCGGTTGATCCAACAGGCAGGAGGGGAGGTTAGCGGTGAAATCACCCTG CGGCGGCGTAACGGCGAATTGCTGGATGTGATGCGTGCCCCCGCCAGTCAGATGCGTCGTGTACGCGGTGCGGATATGGC GATGATTTTTCAGGAGCCGATGACCTCACTGAATCCGGTGTTCACCGTCGGGGAACAGATCGCCGAATCCATCCGTCTGC ATCAGGGGAAAAGCCATCAACAGGCGCTGACCGAAGCGCGCCATATGCTCGATTTGGTGCGCATCCCCGAGGCGCAAAAC GTGTTGTCGCGCTATCCGCATCAACTCTCTGGTGGGATGCGTCAGCGTGTGATGATCGCCATGGCATTGTCCTGTAAACC TGCGCTGCTGATTGCCGACGAACCCACTACCGCGCTGGATGTCACCATCCAGGCACAAATCCTGCAATTGATCCGCGTAC TGCAAAAAGAGATGCAAATGGGGGTGATCTTTATCACCCACGATATGGGCGTGGTGGCGGAAATGGCGGACCGGGTGCAG GTGATGTATCGCGGCGATGTGGTCGAGCGTGCGCCGGTGCAGCAACTGTTTAACCAGCCGCAGCAACCCTACACCCGGGC GCTGCTTTCCGCAGTGCCTAAACTGGGGGCGATGAATGGACAACCGCTCCCGGCTAAGTTCCCGTTGATTCATCGTGATG GTCGTGAAGAAGCCCAGACGCCCCAGGATACCGTGCGTGTTGATCGCCCTCCGGTTTTACAGGTGCGTGATTTGGTGACG CGCTTCGATATCCGCAGTGGTTTGCTTAATCGGGTGAAGCGACGGGTCCACGCGGTGGAGAAGGTCAGTTTCGATCTTTA TGCCGGTGAAACCCTCGCTCTGGTGGGGGAATCCGGCTGTGGTAAATCCACGACTGGCCGTTCATTGCTGCGGTTAGTAG CCAGTCAGGGCGGCACCATCACCTTCGACGGACAACGCATTGATGCGCTGGAAGGGCGGGCGCTGGCCACCTTACGCCGT GATATTCAGTTTATCTTTCAGGATCCTTACGCCTCGCTGGACCCGCGTCTGACGGTGGGCTTCTCCATTATGGAACCGCT GCTGGTGCACCGGACGATGAGCCGACGTCAGGCCGAGCAGCGCGTGGCGTGGTTGCTGGAGCGCGTTGGCTTACTGCCGG AGCATGCGCAACGTTACCCGCATGAATTTTCCGGTGGTCAGCGTCAGCGTATCTGCATTGCGCGCGCGCTGGCGCTGAAC CCTAAAGTGGTGATTGCCGATGAGTCGGTCTCGGCGCTGGATGTGTCGATTCAGGCACAAATCATCAATCTGATGCTCGA TTTGCAGCGCGAATTTGGCATCGCGTTTCTGTTTATTTCGCACGATATGGCGGTGGTGGAACGCATCAGCCATCGCGTGG CGGTGATGTATCTCGGACAGATAGTGGAGATGGGGCCGCGCCAGGCGGTGTTTGAGCAGCCGCGCCATCCCTACACCAAA AAACTGATGGCCGCAGTGCCGGTGGCCGATCCGGCACACCGGCGTCGGGAACGGGCGTTGCTGGTGGATGAAATCCCCAG TCCGATCCGCCCGTTGGGCGATGAGCCGGAAGTCGCGCCATTGATTGAGGTGGCACCGGGCCATTTTGTCGCCCGTCATG CCATCAGCGGCACCTGA Protein sequence : MTDRQLQLTPDQVLAVRDLNVSFQHEGRITEAVRQLSLDLHRGETLALVGESGSGKSVTSLALMRLIQQAGGEVSGEITL RRRNGELLDVMRAPASQMRRVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGKSHQQALTEARHMLDLVRIPEAQN VLSRYPHQLSGGMRQRVMIAMALSCKPALLIADEPTTALDVTIQAQILQLIRVLQKEMQMGVIFITHDMGVVAEMADRVQ VMYRGDVVERAPVQQLFNQPQQPYTRALLSAVPKLGAMNGQPLPAKFPLIHRDGREEAQTPQDTVRVDRPPVLQVRDLVT RFDIRSGLLNRVKRRVHAVEKVSFDLYAGETLALVGESGCGKSTTGRSLLRLVASQGGTITFDGQRIDALEGRALATLRR DIQFIFQDPYASLDPRLTVGFSIMEPLLVHRTMSRRQAEQRVAWLLERVGLLPEHAQRYPHEFSGGQRQRICIARALALN PKVVIADESVSALDVSIQAQIINLMLDLQREFGIAFLFISHDMAVVERISHRVAVMYLGQIVEMGPRQAVFEQPRHPYTK KLMAAVPVADPAHRRRERALLVDEIPSPIRPLGDEPEVAPLIEVAPGHFVARHAISGT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-101 | 41 |
