Gene Information

Name : Pat9b_1254 (Pat9b_1254)
Accession : YP_004115131.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5006
EC number : -
Position : 1406392 - 1407300 bp
Length : 909 bp
Strand : -
Note : PFAM: protein of unknown function DUF6 transmembrane; KEGG: ctu:Ctu_14140 inner membrane transporter RhtA

DNA sequence :
ATGTCTGCACCTCTGACTGCCAAAAAACTGACGCCGGTGGTTTTCCCGATCGCCGTGCTGCTGATTGCCATGTTGTCGCT
ACAAGGCGGCGCATCGCTGGCAAAATCGTTGTTCCCCACCGTCGGTGCGCCAGGTATTACCGCTTTGCGTCTCGGATTGG
GCACCCTCATTCTTTGCGCCATCTTTAAACCCTGGCGTCTGCGTTTTACCCGCGAACAGCGTCTGCCGCTCTTGATGTAC
GGCCTGGCGCTGGGTTGTATGAATTATCTGTTCTATCTCTCCATTCGAACGGTGCCGTTGGGTGTCGCGGTGGGCCTTGA
ATTCACCGGGCCGTTGACACTGGCGCTGCTGGGTTCTCGCCGCCCGCTGGATTTCCTCTGGGTGCTGCTGGCGGTGGTCG
GTTTATGGTTTTTGCTGCCGATTGGCACGGGGATAAGCCACATTGATCCGCTGGGTGCGTTGCTGGCTGTCGGTGCCGGT
GCCTGCTGGGCGGTCTACATTCTGGCAGGACAGCGCGCAGGCGCGGAGCACGGTCCGGCGACGGTGGCGATGGGTTCACT
GGTGGCGTCGATCATTTTTGTCCCACTCGGCCTGACCTTCGCCCATAGCGGCATCTGGCATTGGGAGATTTTGCCGCTCG
CCCTGGTCATTGCCCTGCTCTCCAGCGCCATTCCCTATTCGCTTGAGATGATGGCGTTGACCCGCCTGCCCGCACGGATT
TTTGGCACGTTGATGAGCCTGGAGCCAGCCATGGCGGCCCTCTCTGGCATGCTGTTCCTCGGTGAATTGCTGACGTTAAA
ACAATGGGTTGCTCTGCTGGCGATCATTATCGCCTCCGCCGGTTCCACCCTAACCATGAAACCGAAAAGCCCGCAAATTA
ACGAAGTGGATTTAAATCCCCCACAATAA

Protein sequence :
MSAPLTAKKLTPVVFPIAVLLIAMLSLQGGASLAKSLFPTVGAPGITALRLGLGTLILCAIFKPWRLRFTREQRLPLLMY
GLALGCMNYLFYLSIRTVPLGVAVGLEFTGPLTLALLGSRRPLDFLWVLLAVVGLWFLLPIGTGISHIDPLGALLAVGAG
ACWAVYILAGQRAGAEHGPATVAMGSLVASIIFVPLGLTFAHSGIWHWEILPLALVIALLSSAIPYSLEMMALTRLPARI
FGTLMSLEPAMAALSGMLFLGELLTLKQWVALLAIIIASAGSTLTMKPKSPQINEVDLNPPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0589 NP_938965.1 hypothetical protein Not tested Not named Protein 2e-21 41