Gene Information

Name : Pat9b_1234 (Pat9b_1234)
Accession : YP_004115111.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : putative transposase YhgA family protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5464
EC number : -
Position : 1384614 - 1385495 bp
Length : 882 bp
Strand : +
Note : PFAM: putative transposase YhgA family protein; KEGG: ypi:YpsIP31758_3726 putative transposase

DNA sequence :
ATGAGTGCCACCGCAACGCCGCATGATGCCCTGTTCAAAAAATTTATGAGTCAGCCTGTCCTTGCCAGACAGTTTCTCGA
CATCCATCTGCCGCCCGTCATCCATCAGCACTGCGATCTGGATACGCTGCAACTGGTACCGACCTCCTTTATTGAACGTG
ATCTCAGCGCTTTTTATTCCGACGTGCTGTTCTCAATGAAGACGGATTGTGGCGAAGGATATATCTATACTCTGATTGAG
CACCAAAGCACGCCTGATAAGCATATGACTTTACGCATGATGCGCTATACCATTGCCGCTATGCAGCGTCACATTGACGA
GGGTCATAACGAAATTCCGCTTGTGGTACCGGTATTGTTTTATCAGGGAAAAATCAGTCCCTATCCTTACCCGATGAACT
GGCTCGATTCATTCCGTGATCCAGCACTGGCAAGGCAGGTCTACTGCCATCCTTTCCCGTTGGTCGATATTACCGTGATC
CCGGATGAGGAGATCATGACGCACCGGGGTATCGCGCGCATGGAAATGGCACACAAGATCATACGCCTGCGCGATATGTT
GGAAAACATAGACCCGATAGCCACATTACTGTCGGTGGATTACAATGATAATCTCTCCATCGACGTGATCTTCTATCTGC
TGCGCCATGGGGACACCGATGACCGGGATAAGGTCGTTGAGATATTGATGCAAGCCAAACCGCAACTTAAGGAACAGATT
ATGACAATTGAACAACAGTGGCGGCAGGAGTCTCTTCTGCAGGGGCTTCAGGAAGGTAAATTGCAGGTGGCGCAGCGTAT
GCTGCGGGAGAACGTAGATATTAAAACCATTATCAAATTCACTGGTCTGAGCGAGAAAGAGTTACAGCAGCTCCATGCCT
GA

Protein sequence :
MSATATPHDALFKKFMSQPVLARQFLDIHLPPVIHQHCDLDTLQLVPTSFIERDLSAFYSDVLFSMKTDCGEGYIYTLIE
HQSTPDKHMTLRMMRYTIAAMQRHIDEGHNEIPLVVPVLFYQGKISPYPYPMNWLDSFRDPALARQVYCHPFPLVDITVI
PDEEIMTHRGIARMEMAHKIIRLRDMLENIDPIATLLSVDYNDNLSIDVIFYLLRHGDTDDRDKVVEILMQAKPQLKEQI
MTIEQQWRQESLLQGLQEGKLQVAQRMLRENVDIKTIIKFTGLSEKELQQLHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 1e-76 52
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 1e-77 52
pilW CAF28495.1 putative transposase Not tested YAPI Protein 2e-78 52
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 2e-69 46
PMI2627 YP_002152329.1 transposase Not tested Not named Protein 7e-55 43