Gene Information

Name : Pat9b_1214 (Pat9b_1214)
Accession : YP_004115092.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Virulence
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1364954 - 1365694 bp
Length : 741 bp
Strand : -
Note : KEGG: eta:ETA_22310 HTH-type transcriptional regulator MlrA (MerR-like regulator A); PFAM: regulatory protein MerR; SMART: regulatory protein MerR

DNA sequence : 
ATGGCCTTATACAGTATCGGCGACGTTGCCGAACGCTGTGGAATCAATCCGGTAACACTTCGCGCCTGGCAGCGACGTTA
CGGTCTGTTAAAGCCCCAGCGCACCGAAGGTGGTCACCGTCAGTTTGACGACGAAGATGTTCAGCGCATTGAAGAGATCA
AACGCTGGATAGAGAGTGGCGTGCCCGTTGGCAAGGTCAAGGCCCTGCTGGAGGGAGAACAAGTCAATGTTCACGACGGC
TGGAATACTTTACAAGAGGAGCTGATGAGCGTGCTGCGCCATGTCAGACCCTCAAAGCTGCGCGCCAAAATCGCCACGAT
TGGCCGTGAACATCCGGTGGATGTGCTTATCGATCACGTCATTGTGCCGGTACGCCAGCGCCTCGGGTTAGATCAAAACA
CCGCACGTGCCATGTGCAGCCTGCTCGATGGCGCGTTAATCGATTATGTGGCGTTTTGCCTGACCGGTTCACGTAAAAAA
GCCGGGAAAGATGCGCTGATGATTGGCTGGGGCGTTGACGATCGCACCCGCATCTGGCTGGAAGCCTGGCGTCTGTCGCA
ACAGGGATGGCGGATGGATGTGCTGGCGGAGCCGCTGGAGCTGCCACGTCCGGAGCTGTTCCCCGGCCAGAATCTGTTTG
TATGGACCGGCAAAAAACTGACGCGTCGCCAGCATGAACAGCTGGAACACTGGCAGGCGCAAGGATTTAACGTTCACCTC
CACGACCCCAACACCAAATAA

Protein sequence : 
MALYSIGDVAERCGINPVTLRAWQRRYGLLKPQRTEGGHRQFDDEDVQRIEEIKRWIESGVPVGKVKALLEGEQVNVHDG
WNTLQEELMSVLRHVRPSKLRAKIATIGREHPVDVLIDHVIVPVRQRLGLDQNTARAMCSLLDGALIDYVAFCLTGSRKK
AGKDALMIGWGVDDRTRIWLEAWRLSQQGWRMDVLAEPLELPRPELFPGQNLFVWTGKKLTRRQHEQLEHWQAQGFNVHL
HDPNTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 2e-43 43
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 1e-43 43
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 1e-42 43
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 3e-43 43
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 3e-43 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pat9b_1214 YP_004115092.1 MerR family transcriptional regulator VFG0491 Protein 8e-44 43