Gene Information

Name : Pat9b_1211 (Pat9b_1211)
Accession : YP_004115089.1
Strain : Pantoea sp. At-9b
Genome accession: NC_014837
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 1363122 - 1364057 bp
Length : 936 bp
Strand : +
Note : KEGG: ypy:YPK_2863 ABC transporter related; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase

DNA sequence : 
ATGATTGAATTTCACCAGGTTAATAAAGCTTTTGACGGTAAAGCGGCGGTGCGCAATGTGTCGCTGCATATCGAAAAGGG
CAGCTTCACAGTGCTGATTGGTACTTCGGGTTCCGGTAAGTCCACCACATTGAAGATGATCAATCGGTTGGTGGAGCATG
ACAGCGGAGAGATCCGTTTCGCCGGAGCAGCCATAGAACGCATGGATGTGCGTGCCTTGCGACGCCGTATTGGCTATGCG
ATTCAATCCATCGGCCTGTTCCCACACTGGAACGTGGCGAAAAACATCGCGACGGTGCCCTCGCTGCTTGGATGGCCACA
GGCGCGCATCCGTGAGCGGGTCGCTGAGCTGCTGGCGCTGTTAAACCTTGATAGCGAACTGGCGACGCGCTATCCGCACC
AGCTTTCTGGCGGTCAGCAGCAGCGCGTGGGGGTGGCACGTGCGCTGGCGGCGGATCCTGAGTTACTGCTGATGGATGAA
CCTTTCGGCGCGCTCGATCCGGTCAATCGTCAGGCGCTGCAACAGGAGATGCTGCGTATTCACCGCCTGTCCGGGCGCAC
CATTGTGCTGGTGACGCATGATATCGACGAGGCGCTGACCCTGGCGGACCAACTGGTGCTGATGGATGGCGGCGAAATTG
TCCAGCAGGGCAAGCCGATTGAATTGCTGACGCAGCCAGCCAGCGATTTTGCCCGTGAATTCTTCGGTCACAGTGAACTC
GGCGTGCGCCTGTTGGCGCTGGGCCGGGCCGGGAACGCGGTGAGACGTGGAGAGTGGCTGGAAGCTGAACCGATTGCTGC
GGGCTTGACCCTACGTGAGGCGTTGTCGCAGTTTATCGCCCGACGTACCGACAAGCTGCCTGTGGTGGATCAACATCAGC
AGCCGCTCGGCGTGCTGCACTTCAGTGATTTACTGCGTCAACGCGAGGCGGGGTAA

Protein sequence : 
MIEFHQVNKAFDGKAAVRNVSLHIEKGSFTVLIGTSGSGKSTTLKMINRLVEHDSGEIRFAGAAIERMDVRALRRRIGYA
IQSIGLFPHWNVAKNIATVPSLLGWPQARIRERVAELLALLNLDSELATRYPHQLSGGQQQRVGVARALAADPELLLMDE
PFGALDPVNRQALQQEMLRIHRLSGRTIVLVTHDIDEALTLADQLVLMDGGEIVQQGKPIELLTQPASDFAREFFGHSEL
GVRLLALGRAGNAVRRGEWLEAEPIAAGLTLREALSQFIARRTDKLPVVDQHQQPLGVLHFSDLLRQREAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-48 52
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-48 51